Streptomyces yangpuensis: NRK68_25280
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Entry
NRK68_25280 CDS
T08585
Name
(GenBank) HAMP domain-containing protein
Organism
syan
Streptomyces yangpuensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAMP
HAMP_2
Response_reg
HATPase_c
HisKA
GAF_2
GAF
GLE1
Nup49_C
HAUS-augmin3
ATG14
RNase_Y_N
Motif
Other DBs
NCBI-ProteinID:
UUY50243
LinkDB
All DBs
Position
5498322..5503847
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AA seq
1841 aa
AA seq
DB search
MESGAVVRRTGTRPKGGRSRRGGTTEVDTAALNRLLTALVSMRDGNFRKRLTVSGEGVMA
EIAAVYNEVADRNLHLTGELSRVRRMVGREGKLSERLETGACEGSWAAAIDASNQLVDDL
ARPVSEVGRVLSAVAEGDLDQRMDLRTQAADGVGHPLRGEFLKVGRTVNNLVDQLSAFTD
EVTRVALEVGTEGKLGGQAQVRGMSGSWKDLTDSVNTMAYRLTAQVRDIALVTTAVAKGD
LSRKVTVHVAGEMLQLKNTVNTMVDQLSSFSSEVTRVAREVGTEGELGGQAKVPGVAGVW
KDLTDSVNTMAGNLTAQVRGIAQVTTAVANGDLSQKVRVSARGEVAQLAETINQMTETLR
TFADEVTRVASEVGAKGLLGGQAQVPGAAGTWKDLTDSVNTVFRNLTTQVRDIAQVTTAV
ANGDLSQKVTVDVAGEMLELKNTVNTMVDQLQSFGAEVTRVAREVGVEGELGGQAQVPGA
AGTWKDLTDSVNTAFRNLTGQVRNIAQVTTAVANGDLSQKVTVDVSGEMLQLKNTVNTMV
DQLSSFADQVTRMARDVGTEGRLGGQARVEGVSGTWKELTDSVNFMAGNLTSQVRQIAQV
TTAVARGDLSQKIDVDARGEILELKNTINTMVDQLSAFAEQVTRVARDVGTEGRLGGQAQ
VPGVAGVWRDLTDSVNGMAGNLTSQVRNIAQVATAVARGDLSQKIDVDARGEILELKNTL
NTMVDQLSNFAEQVTRVAREVGTEGILGGQAEVKGVSGTWKDLTQSVNFMANNLTSQVRN
IAEVTTAVAMGDLSKKITVDAKGEILELVTTVNTMVDQLSSFAEQVTRVAREVGTEGILG
GQARVRGVTGIWKDLSDNVNTMAGNLTAQVRGIAQVSAAVANGDLTKKVTVEARGEVAQL
ADTVNTMVKTLSSFADEVTRVAREVGTEGRLGGQAHVPGVSGTWKDLTDSVNFMASNLTG
QVRQIAMVTTAIAKGDMTKKIDIDARGEILELKTTINTMVDQLSSFADQVTRVAREVGTE
GILGGQARVRDVDGTWRDLTESVNEMAGNLTRQVRAIAAVATAVTRGDLSLKVDVDAAGE
IQVLQDNINTMIVNLRDTTLANKEQDWLKGNLARISALMQGRRDLDDVASLIMSELTPVV
SAQHGAFFLAVPAGGTTEIGTDGGAEGSYELRMRGSYAYAGGQMPISFRPGEGLIGAVAE
EKRTILVENTPPGYLKISSGLGEAPPAHVIVLPVLFEGKVLGVIELASFTGFTQIQKDFL
SQIAEMIGTSVNTISVNSKTEMLLKQSQEMTEQLRERSDELENRQKALQAANAELEEKAE
LLAQQNRDIEVKNTEIEEARQVLEERAEQLAVSMRYKSEFLANMSHELRTPLNSLLILAK
LLADNADENLSPKQVEFAETIHGAGSDLLQLINDILDLSKVEAGKMDVSPTRIALVQLVD
YVEATFRPLTAEKGLDFSVRVSPELPATLHTDEQRLLQVLRNLLSNAVKFTDTGAVELVI
RPAGADVPAEIREQLLEAGSLREADADLIAFSVTDTGIGIAASKMLVIFEAFKQADGTTS
RKYGGTGLGLSISREIARLLGGEIHAASEPGRGSTFTLYLPLHPSELPPQGYAPPTPGGA
RGELYRRSLDGARPGLPVLPAGPAAAPAAQPQPERSAPPAAAAGQGGGTGLFRRRRKALS
DLEPRTAVPGQPNAEGAEDAWDAAEEELPTVARTYDFRGERVLIVDDDVRNVFALTSVLE
QHGLAVLYAENGREGIEVLEQHDDVKVVLMDIMMPEMDGYATTSAIRRMPQFAGLPIIAL
TAKAMKGDREKAIDSGASDYVTKPVDPDYLLSVMEQWMRGK
NT seq
5526 nt
NT seq
+upstream
nt +downstream
nt
gtggagtctggcgcagtggtgcggcgtacgggaacgcggccgaagggcgggcggtcccgg
cgcggcggcacgacagaggtcgataccgccgcgctgaacaggctgctcacggcgctggtg
tcgatgcgggacggaaacttccgcaagcggctgacggtgtccggcgagggcgtgatggcg
gagatcgccgccgtctacaacgaggtcgccgaccggaacctccacctgaccggggaactg
tcccgggtccggcggatggtgggccgtgaggggaagctcagcgaacggctggaaacgggt
gcctgtgagggctcctgggcggccgcgatcgacgcctcgaaccagctcgtcgacgatctg
gcccggccggtgtccgaggtgggacgggtgctgtcggcggtggccgagggtgacctggac
cagcggatggacctgcggacgcaggcggccgacggggtcgggcatccgctgcgcggcgag
ttcctgaaggtcgggcgtacggtcaacaacctggtcgaccagctgtccgcgttcaccgac
gaggtgacgcgcgtggcgctggaggtgggtaccgagggcaagctcggcggccaggcccag
gtgcgcgggatgtccggttcctggaaggatctgaccgactccgtcaacacgatggcgtac
cggctcaccgcgcaggtgcgtgacatcgctctcgtcacgacggcggtcgcgaagggtgac
ctgtcgcgcaaggtcaccgtgcacgtggccggcgagatgctccagctgaagaacaccgtg
aacacgatggtggaccagctctcgtccttctcctccgaggtgaccagggtcgcccgcgag
gtgggtacggagggcgagctgggcggccaggccaaggtgcccggggtcgcgggtgtgtgg
aaggacctgaccgattccgtcaacacgatggccgggaacctgacggcccaggtgcgcggg
atcgcgcaggtgacgacggcggtcgccaacggtgacctgtcgcagaaggtacgggtcagc
gcgcgcggcgaggtcgcgcagctggccgaaacgatcaaccagatgaccgagacgctgcgg
accttcgcggacgaggtcacgcgggtggcgagcgaggtcggcgccaagggcctgctcggc
gggcaggcgcaggtgccgggggcggcggggacgtggaaggacctcaccgactcggtgaac
acggtcttccgcaacctcaccacccaggtgcgggacatcgctcaggtgaccacggcggtg
gccaacggcgacctgtcgcagaaggtcacggtcgacgtggccggcgagatgctggagctg
aagaacaccgtcaacacgatggtcgaccagctccagtccttcggtgcggaagtgacgcgg
gtggcccgtgaggtcggcgtcgagggtgagctgggcggtcaggcccaggtgcccggggct
gccggtacctggaaggacctcaccgactcggtgaacacggccttccgcaacctcaccggg
caggtccgcaacatcgcccaggtgaccacggcggtggccaacggcgacctgtcgcagaag
gtcacggtggacgtctccggcgagatgctccagctgaagaacaccgtgaacaccatggtc
gaccagctgtcgtccttcgccgaccaggtcacgcggatggcgcgggacgtgggtacggag
ggccggctcggcggccaggcccgggtggagggggtctccggtacctggaaggagctgacc
gactccgtcaacttcatggccgggaacctgacctcgcaggtgcgccagatcgcccaggtg
accactgcggtggcgcgcggtgacctgtcgcagaagatcgacgtggacgcccggggcgag
atcctggagctgaagaacaccatcaacacgatggtcgaccagctctccgccttcgcggag
caggtgacccgggtggcgcgggacgtggggacggagggccgcctcggcggccaggcgcag
gtgcccggggtggccggtgtctggcgcgacctgacggactcggtgaacggcatggccggg
aacctgacctcgcaggtccgcaacatcgcccaggtcgccacggcggtggcgcgcggtgat
ctgtcgcagaagatcgacgtggacgcccggggcgagatcctggagctgaagaacaccctc
aacacgatggtcgaccagctctcgaacttcgccgagcaggtgacccgggtggcccgggag
gtgggcacggagggcatcctcggcggtcaggccgaggtcaagggtgtctccggcacctgg
aaggacctcacccagtccgtcaacttcatggcgaacaacttgacctcgcaggtgcgcaac
atcgccgaggtgacgacggcggtcgcgatgggggacctctcgaagaagatcaccgtcgac
gccaagggcgagatcctcgaactcgtcacgaccgtcaacacgatggtggaccagctgtcc
tccttcgccgagcaggtgacccgggtggcccgcgaggtgggcaccgagggcatcctcgga
ggccaggcccgggtccgcggggtcaccggcatctggaaggacctcagcgacaacgtcaac
acgatggccgggaacctgacggcccaggtgcgcgggatcgcccaggtctcggcggccgtc
gccaacggcgatctgacgaagaaggtgaccgtcgaggcgcgcggcgaggtcgcgcagctc
gccgacaccgtcaacacgatggtgaagaccctgtcgtcgttcgccgacgaggtgacgcgg
gtggcccgcgaggtgggtacggagggccgcctcggcgggcaggcgcacgtgcccggggtg
tcggggacctggaaggacctcaccgactcggtgaacttcatggcctccaacctcaccggt
caggtgcggcagatcgccatggtcacgaccgccatcgccaagggcgacatgaccaagaag
atcgacatcgacgcccgcggcgagatcctggagctcaagaccaccatcaacacgatggtc
gaccagctgtcctccttcgccgaccaggtgacgcgggtggcccgcgaggtgggcaccgag
ggcatcctcggaggccaggcccgggtccgggacgttgacggcacctggcgggacctgacc
gagtccgtgaacgagatggccggcaacctcacccggcaggtgcgggcgatcgcggccgtg
gcgaccgcggtgacccgcggggacctcagcctgaaggtcgacgtggacgcggcgggcgag
atccaggtcctgcaggacaacatcaacacgatgatcgtcaacctgcgcgacaccaccctg
gccaacaaggagcaggactggctcaagggcaacctggcccggatctccgcactgatgcag
gggcgtcgcgacctcgacgacgtcgcctcgctgatcatgagcgagctgactccggtggtc
tccgctcagcacggtgccttcttcctggcggtgccggccggcggcaccaccgagatcggg
acggacgggggcgcggagggctcgtacgagctgcggatgcgcgggagctacgcgtacgcc
ggcggtcagatgcccatctccttccggccgggggaggggctgatcggggcggtcgccgag
gagaagcggacgatcctcgtcgagaacaccccgcccggctacctgaagatctcctcgggt
ctcggcgaggccccgccggcgcacgtgatcgtgctgccggtgctcttcgaggggaaggtg
ctcggcgtcatcgagctggcctccttcacgggcttcacgcagatccagaaggacttcctc
agccagatcgccgagatgatcggtacgagcgtcaacaccatcagcgtcaactccaagacg
gagatgctgctgaagcagtcgcaggagatgaccgagcagctgcgcgagcgttccgacgag
ctggagaaccggcagaaggccctgcaggccgccaacgccgagctggaggagaaggccgaa
ctgctggcccagcagaaccgggacatcgaggtgaagaacaccgagatcgaggaggcccgg
caggtcctggaggagcgtgccgagcagctcgcggtctcgatgcgctacaagtccgagttc
ctggcgaacatgtcgcacgagctgcgcaccccgctcaactcgctgctgatcctggccaag
ctgctcgccgacaacgccgacgagaacctgtcgccgaagcaggtggagttcgccgagacc
atccacggcgccggcagtgacctgctccagctgatcaacgacatcctcgacctgtcgaag
gtcgaggccgggaagatggacgtctcaccgacccggatcgcgctggtccagctcgtggac
tacgtggaggcgaccttccggccgctgacggcggagaagggcctcgacttctccgtgcgg
gtctccccggagctgcccgccaccctgcacaccgatgagcagcggctgctgcaggtgctg
cgcaacctgctgtcgaacgcggtgaagttcaccgacaccggcgcggtggagctggtgatc
cggcccgccggcgccgatgtgccggccgagatccgcgagcagctgctggaggccggttcg
ctgcgggaggcggacgcggacctgatcgccttctcggtcaccgacaccggcatcgggatc
gcggcgagcaagatgctggtgatcttcgaggcgttcaagcaggcggacgggaccaccagc
cgcaagtacggcggcaccgggctggggctgtccatcagccgggagatcgcccggctgctg
ggcggcgagatccacgcggcgagcgagcccggccgcggctccaccttcacgctgtacctg
ccgctgcacccgagcgagctgccgccgcagggctacgcgccgcccaccccgggaggggcc
cgcggcgagctgtaccgccggtccctggacggggcccggcccggactgccggtgctgccg
gccgggcccgcggccgctccggcggcgcagccgcagcccgagcggtccgcaccgccggcg
gcggccgccggacagggcggcgggaccgggctgttccggcgccggcgcaaggcgctgagc
gacctggagccgcgtacggcggtgcccgggcagccgaacgcggagggagccgaggacgcc
tgggacgccgcggaggaggagctgccgacggtggcccggacgtacgacttccgcggcgag
cgggtgctcatcgtggacgacgacgtccgcaacgtcttcgcgctgaccagcgtgctggaa
cagcacgggctggcggtgctgtacgcggagaacggccgggagggcatcgaggtcctggag
cagcacgacgacgtgaaggtcgtgctgatggacatcatgatgcccgagatggacgggtac
gccacgacctcggcgatccggcggatgccgcagttcgccggcctgccgatcatcgcgctg
acggcgaaggcgatgaagggggaccgggagaaggcgatcgactccggtgcttccgactac
gtcaccaagccggtcgacccggactacctgctgtcggtgatggagcagtggatgcggggc
aagtga
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