Streptomyces yangpuensis: NRK68_25300
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Entry
NRK68_25300 CDS
T08585
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
syan
Streptomyces yangpuensis
Brite
KEGG Orthology (KO) [BR:
syan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
syan03009
]
NRK68_25300 (rimO)
Enzymes [BR:
syan01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
NRK68_25300 (rimO)
Ribosome biogenesis [BR:
syan03009
]
Prokaryotic type
ribosomal protein modification factors
NRK68_25300 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
YajR_YAM
TRAM
Motif
Other DBs
NCBI-ProteinID:
UUY50247
UniProt:
A0ABY5Q1D9
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All DBs
Position
5508977..5510482
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AA seq
501 aa
AA seq
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MPERRTVALVTLGCARNEVDSEELAGRLAADGWELVEDAADADVAVVNTCGFVEAAKKDS
VDALLEANDLKDHGRTQAVVAVGCMAERYGKELAEALPEADGVLGFDDYADISNRLQVIL
SGGSVEAHTPRDRRQLLPISPAARQAADVALPGHAQAPAEEPAEAPADLPEGVAPASGPR
APLRRRLDKSPVASVKLASGCDRRCSFCAIPSFRGSFISRRPGDVLGETRWLAEQGVKEI
MLVSENNTSYGKDLGDIRLLETLLPELAAVDGIERVRVSYLQPAEMRPGLIDVLTSTPKV
VPYFDLSFQHSAPDVLRAMRRFGDTDRFLELLDTIRSKAPQAGVRSNFIVGFPGETEADF
AELERFLTHARLDAIGVFGYSDEDGTEAVTYENKLDEDTIAERLAHMQRLAEELTAQRAE
ERIGETLEVLVETVVPFDEAEEGEGAYGRAAHQAPETDGQVVFTDGTGLVPGRIVTAKVV
GTLGVDLVAEPLDFDFEEAAG
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaacgccgtaccgtcgcccttgtcactcttggctgcgcccgtaacgaggtggac
tcggaggagctcgcaggccgcttggcggcggatggctgggagctcgtcgaggacgccgcc
gacgcggacgtagccgtcgtcaacacctgtggcttcgtcgaagccgccaagaaggactcc
gtagacgccctgctggaagccaacgatctcaaggatcacggcaggacccaggccgtcgtc
gccgtcggctgcatggccgagcgctacggcaaggagctcgccgaggcccttcccgaggcc
gacggggtcctcggcttcgacgactacgccgacatctccaaccgcctccaggtcatcctc
agcggtggcagtgtcgaagcccacaccccgcgcgaccgccgccagctgctgcccatcagc
cccgccgcccgccaggccgcggacgtcgccctccccgggcacgcccaggcgcccgccgag
gagcccgcagaggcccccgcggacctgccggagggtgtcgcacccgcctcgggcccgcgc
gccccgctgcgccgccgcctggacaagagcccggtggcctcggtcaagctggcctccggc
tgcgaccggcgctgctccttctgcgccatcccgtccttccgcggatcgttcatctcccgc
cgccccggcgacgtgctgggcgagacccgctggctcgccgagcagggcgtcaaggagatc
atgctggtctccgagaacaacacctcgtacggcaaggacctcggcgacatccggctcctg
gagaccctgctgcccgagctcgccgccgtcgacggcatcgagcgcgtccgtgtcagctac
ctccagcccgcggagatgcgcccgggcctgatcgacgtgctgacctccacgcccaaggtc
gtgccgtacttcgacctgtccttccagcactcggcccccgacgtgctgcgcgccatgcgc
cgcttcggcgacaccgaccgcttcctggagctgctggacaccatccgctccaaggccccg
caggccggcgtccgctcgaacttcatcgtcggcttccccggcgagacggaagccgacttc
gccgagctggagcgtttcctcacccacgcccgcctggacgcgatcggtgtcttcggctac
tccgacgaggacggcaccgaggccgtcacctacgagaacaagctggacgaggacacgatc
gccgagcgcctcgcgcacatgcagcggctcgccgaggagctcaccgcccagcgtgcggaa
gagcggatcggcgagaccctggaagtgctcgtggagacggtcgtccccttcgacgaggcc
gaggagggcgagggagcctacggacgcgccgcgcaccaggcccccgaaaccgacggccag
gtcgtcttcaccgacggcacgggcctggtccccgggcgtatcgtcacggcgaaggtggtc
ggcaccctgggagtggacctggtggccgagcccctggacttcgacttcgaggaggcggcc
ggatga
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