Streptomyces yangpuensis: NRK68_25630
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Entry
NRK68_25630 CDS
T08585
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
syan
Streptomyces yangpuensis
Pathway
syan03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
syan00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NRK68_25630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
syan03019
]
NRK68_25630
03400 DNA repair and recombination proteins [BR:
syan03400
]
NRK68_25630
Enzymes [BR:
syan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NRK68_25630
Messenger RNA biogenesis [BR:
syan03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NRK68_25630
DNA repair and recombination proteins [BR:
syan03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NRK68_25630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
Pribosyltran
DUF8096
PglZ_C
KORA
AAA_22
Motif
Other DBs
NCBI-ProteinID:
UUY50305
UniProt:
A0ABY5Q255
LinkDB
All DBs
Position
complement(5587777..5589936)
Genome browser
AA seq
719 aa
AA seq
DB search
MNADLRSSADSVLARLVGDPTGTARLREDQWLAIEALVAHKRRALVVQRTGWGKSAVYFV
ATSLLRAAGAGPTVIVSPLLALMRNQVEAAARAGIRAHTINSANPEEWEGIQAEVAAGEV
DVLLVSPERLNNPDFRDQVLPKLSAATGLLVVDEAHCISDWGHDFRPDYRRLRTMLADLP
LGVPVLATTATANARVTADVAEQLGTGAGTDALVLRGPLDRESLSLAVLTLPDAAHRLAW
LADHLAELPGSGIIYTLTVAAAEEVTAYLRHRGHTVSSYTGKTENADRQQAEDDLQANRV
KALVATSALGMGFDKPDLGFVVHLGSPSSPIAYYQQVGRAGRGVEHAEVLLLPGREDEAI
WQYFASVAFPPEEQVRRTLDVLAHAGRPLSLPALEPLVDLRRTRLETMLKVLDVDGAVHR
VKGGWTSTGEPWVYDAERYAWVARQRAAEQQAMRDYAAATGCRMEFLRRQLDDEEAAPCG
RCDNCAGARFAAEVSTTALDTARGELGRPGVELEPRKMWPTGLAAVGVNLKGRIPAGEQA
STGRALGRLSDIGWGNRLRPMLAPQAPDQAVPDDVAQAVVAVLADWARGPGGWASGAPDA
PERPVGVVALPSRSRPQLVGSLAARIAKVGRMPLLGTVAYTDEVPEFGLASSNSAQRVRG
LHHALAVPQELAAALERTPGPVLLVDDRAESGWTLAVAARLLRRAGAKEVFPLVLALQG
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcagacctgaggtcctccgccgactccgtactcgcccgcctcgtgggggacccc
acgggtaccgcccggctgcgcgaggaccagtggctcgcgatcgaggccctcgtcgcgcac
aagcggcgggcgctcgtggtccagcgcacgggctggggcaagtccgccgtgtacttcgtc
gcgacgtcgctgctgcgggcggcgggtgccggaccgaccgtgatcgtctcgccgctcctc
gcgctgatgcgcaatcaggtcgaggcggcggcccgggccgggatccgcgcccacaccatc
aactccgccaatcccgaagaatgggaagggatccaggccgaggtcgcggcgggcgaggtc
gacgtcctgctggtgagcccggagcggctgaacaacccggacttccgcgaccaggtactc
cccaagctctcggcggccaccgggctgctcgtggtggacgaggcgcactgcatctccgac
tgggggcacgacttccgccccgactaccgccggctgcgcaccatgctggcggacctcccg
ctgggcgtcccggtcctcgcgacgaccgccacggccaacgcccgcgtgaccgccgatgtc
gccgagcagctgggcaccggcgccggcacggacgcgctggtgctgcgcggcccgctggac
cgcgagagcctcagcctggcggtcctgaccctgcccgacgcggcgcaccggctggcctgg
ctcgcggaccacctcgcagagctgcccggatcggggatcatctacacactgacggtggcg
gcggccgaagaggtcaccgcgtacctgcgccaccgtgggcacaccgtgtcctcgtacacc
ggcaagacggagaacgcggaccgccagcaggccgaggacgacctgcaggcgaaccgggtc
aaggcgctggtggccacctccgccctcgggatgggcttcgacaagcccgacctgggattc
gtcgtgcacctggggtcgccctcctcgccgatcgcctactaccagcaggtcggccgtgcg
ggccgtggtgtggagcacgcggaggtgctgctgctgcccggccgggaggacgaggcgatc
tggcagtacttcgcgtcggtcgccttcccgcccgaggaacaggtgcgccgcaccctcgac
gtcctcgctcatgcggggcgtccgctgtcgctgcccgccctggagccactggtcgatctg
cgccgcacgcgcctggagaccatgctcaaggtcctcgacgtcgacggcgccgtgcaccgc
gtcaagggcggctggacctcgacgggtgagccgtgggtgtacgacgccgagcgctacgcc
tgggtggcccgccagcgggccgccgagcagcaggccatgcgcgactacgcggcggccacg
ggctgccggatggagttcctgcgccggcagctcgacgacgaggaggccgctccctgcggc
cgctgcgacaactgcgcgggggcgcggttcgccgccgaggtgtccaccacggctctggac
accgcgcgtggtgagctcggccgccccggtgtggagttggagccgcgcaagatgtggccg
accgggctcgccgcggtcggtgtaaacctcaaggggcgtatccccgccggggaacaggcc
tcgacgggccgggccctgggccggctgtccgacatcggctggggcaaccggctgcgcccg
atgctcgccccccaggctcccgaccaagcggttccggacgatgtggcgcaggccgtggtc
gcggtgctcgccgactgggcccggggcccgggcggttgggcctccggagccccggacgca
ccggaacgtccggtgggcgtggtcgcgctgccgtcgcgcagccgcccccagttggtcggc
tcgctggccgcacggatcgccaaggtggggcggatgcccctgctgggtacggtcgcctac
accgatgaggtacccgagttcgggctggcgtcgtccaacagcgcccaacgggtccgaggt
ctccaccacgccctggccgttccgcaggagctggctgcggcgctggagcggactcccggg
ccggtactgctcgtggacgaccgcgcggagagcggatggacactcgccgtggccgcccgg
ctcctgcgacgtgcaggcgcaaaggaggtgttcccgctggtgctggcgctccaggggtga
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