Streptomyces yangpuensis: NRK68_28235
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Entry
NRK68_28235 CDS
T08585
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
syan
Streptomyces yangpuensis
Pathway
syan02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
syan00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
NRK68_28235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
syan03021
]
NRK68_28235
Transcription machinery [BR:
syan03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NRK68_28235
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
SR-25
Sigma70_r1_1
CDC27
HC2
Motif
Other DBs
NCBI-ProteinID:
UUY50782
UniProt:
A0ABY5Q2X0
LinkDB
All DBs
Position
complement(6216057..6217655)
Genome browser
AA seq
532 aa
AA seq
DB search
MSLSPSRTFPPEIAESEALVALVERGREQGHINGDDVRQAFEAGRIPVDQWKRVLRSLNQ
VLDEEGVALHVSAAPATKAAAKKPRKAAAAPARTVAKKAAAAPRPIGARKTAATAAATTV
TSTASAISAPSAAAAAEAAAPAEAAAEPKKRTVKKTAAKKTAVKKTAAAKKTSAKDADEG
ENPVVEGEDWAAEDLVDEAEEEAPKAGAQGFVLSDEDEDDAPAQTVMVAGATADPVKDYL
KLIGKVPLLNAEQEVELAKRIEAGLFSEYKLEEEEDHKPAFKRELEILVEDGRRAKNHLL
EANLRLVVSLAKRYTGRGMLFLDLIQEGNVGLIRAVEKFDYTKGFKFSTYATWWIRQAIT
RAMADQSRTIRIPVHMVEIINKLARVQRQMLQDLGREPTPEELGKELDMTPEKVIEVQKY
GREPISLHTPLGEEGDSEFGDLIEDSEAVVPADAVSFTFLQEQLQSILGTLSEREAGVVS
MRYGLNDGQPKTLDEIGRVYGVTRERIRQIESKTMSKLRHPSRSQVLRDYLD
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgctcagcccgtcccgtacgttccctccggagatcgccgaatccgaggccctcgtc
gcgctcgtcgagcgcggccgcgagcagggtcacatcaacggtgacgacgtgcgccaggcc
ttcgaggccggccgcatcccggtggaccagtggaagcgggtcctgcgcagcctgaaccag
gtcctcgacgaggagggtgtcgcccttcacgtcagcgcggcccccgccaccaaggctgcc
gcgaagaagccccgcaaggctgccgccgcccccgcccgtaccgtggccaagaaggccgcc
gccgcgccgcgccccatcggtgcgcgcaagaccgcggccaccgccgcggccaccaccgtc
acgtccacggcttcggcgatatccgctccgtcggccgccgcggctgcggaggcggcggcg
ccggccgaggccgccgccgagccgaagaagcgcacggtcaagaagaccgccgccaagaag
accgccgtgaagaagaccgcggcggcgaagaagaccagcgccaaggacgccgacgagggc
gagaacccggtcgtcgagggtgaggactgggccgcggaggacctcgtcgacgaggccgag
gaggaggcccccaaggccggtgcccagggcttcgtgctgtccgacgaggacgaggacgac
gccccggcgcagacggtcatggtggccggtgccaccgccgacccggtcaaggactacctg
aagctgatcggcaaggtgccgctcctcaacgccgagcaggaggtcgagctcgccaagcgc
atcgaggccggtctcttctccgagtacaagctcgaagaggaggaggaccacaagcccgcc
ttcaagcgcgagctggagatcctcgtcgaggacggccgccgggcgaagaaccacctgctg
gaggccaacctccgtctcgtggtctccctcgccaagcgctacaccggccgcggcatgctc
ttcctggacctgatccaggagggcaacgtcggcctgatccgcgccgtggagaagttcgac
tacaccaagggcttcaagttctccacgtatgcgacctggtggatccggcaggcgatcacg
cgtgccatggccgaccagtcgcgcaccatccgcatccccgtccacatggtcgagatcatc
aacaagctcgcccgcgtgcagcgccagatgctccaggacctcggccgggagcccactccg
gaggagctgggcaaggaactcgacatgacccccgagaaggtcatcgaggtccagaagtac
ggccgcgagccgatctccctgcacaccccgctgggtgaggagggcgacagcgagttcggt
gacctcatcgaggactccgaggcggtcgtgccggcggacgcggtctcgttcaccttcctc
caggagcagctccagtcgatcctgggcacgctctcggagcgcgaggcgggcgtggtctcg
atgcgctacggcctcaacgacggccagccgaagaccctcgacgagatcggccgcgtgtac
ggggtcacccgtgagcgcatccgccagatcgagtcgaagaccatgtcgaagctccgccac
ccgtcgcgctcgcaggtcctgcgcgactacctcgactga
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