KEGG   Streptomyces yangpuensis: NRK68_28235
Entry
NRK68_28235       CDS       T08585                                 
Name
(GenBank) RNA polymerase sigma factor
  KO
K03086  RNA polymerase primary sigma factor
Organism
syan  Streptomyces yangpuensis
Pathway
syan02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:syan00001]
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    NRK68_28235
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:syan03021]
    NRK68_28235
Transcription machinery [BR:syan03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     NRK68_28235
SSDB
Motif
Pfam: Sigma70_r3 Sigma70_r2 Sigma70_r4 Sigma70_r1_2 SR-25 Sigma70_r1_1 CDC27 HC2
Other DBs
NCBI-ProteinID: UUY50782
UniProt: A0ABY5Q2X0
LinkDB
Position
complement(6216057..6217655)
AA seq 532 aa
MSLSPSRTFPPEIAESEALVALVERGREQGHINGDDVRQAFEAGRIPVDQWKRVLRSLNQ
VLDEEGVALHVSAAPATKAAAKKPRKAAAAPARTVAKKAAAAPRPIGARKTAATAAATTV
TSTASAISAPSAAAAAEAAAPAEAAAEPKKRTVKKTAAKKTAVKKTAAAKKTSAKDADEG
ENPVVEGEDWAAEDLVDEAEEEAPKAGAQGFVLSDEDEDDAPAQTVMVAGATADPVKDYL
KLIGKVPLLNAEQEVELAKRIEAGLFSEYKLEEEEDHKPAFKRELEILVEDGRRAKNHLL
EANLRLVVSLAKRYTGRGMLFLDLIQEGNVGLIRAVEKFDYTKGFKFSTYATWWIRQAIT
RAMADQSRTIRIPVHMVEIINKLARVQRQMLQDLGREPTPEELGKELDMTPEKVIEVQKY
GREPISLHTPLGEEGDSEFGDLIEDSEAVVPADAVSFTFLQEQLQSILGTLSEREAGVVS
MRYGLNDGQPKTLDEIGRVYGVTRERIRQIESKTMSKLRHPSRSQVLRDYLD
NT seq 1599 nt   +upstreamnt  +downstreamnt
gtgtcgctcagcccgtcccgtacgttccctccggagatcgccgaatccgaggccctcgtc
gcgctcgtcgagcgcggccgcgagcagggtcacatcaacggtgacgacgtgcgccaggcc
ttcgaggccggccgcatcccggtggaccagtggaagcgggtcctgcgcagcctgaaccag
gtcctcgacgaggagggtgtcgcccttcacgtcagcgcggcccccgccaccaaggctgcc
gcgaagaagccccgcaaggctgccgccgcccccgcccgtaccgtggccaagaaggccgcc
gccgcgccgcgccccatcggtgcgcgcaagaccgcggccaccgccgcggccaccaccgtc
acgtccacggcttcggcgatatccgctccgtcggccgccgcggctgcggaggcggcggcg
ccggccgaggccgccgccgagccgaagaagcgcacggtcaagaagaccgccgccaagaag
accgccgtgaagaagaccgcggcggcgaagaagaccagcgccaaggacgccgacgagggc
gagaacccggtcgtcgagggtgaggactgggccgcggaggacctcgtcgacgaggccgag
gaggaggcccccaaggccggtgcccagggcttcgtgctgtccgacgaggacgaggacgac
gccccggcgcagacggtcatggtggccggtgccaccgccgacccggtcaaggactacctg
aagctgatcggcaaggtgccgctcctcaacgccgagcaggaggtcgagctcgccaagcgc
atcgaggccggtctcttctccgagtacaagctcgaagaggaggaggaccacaagcccgcc
ttcaagcgcgagctggagatcctcgtcgaggacggccgccgggcgaagaaccacctgctg
gaggccaacctccgtctcgtggtctccctcgccaagcgctacaccggccgcggcatgctc
ttcctggacctgatccaggagggcaacgtcggcctgatccgcgccgtggagaagttcgac
tacaccaagggcttcaagttctccacgtatgcgacctggtggatccggcaggcgatcacg
cgtgccatggccgaccagtcgcgcaccatccgcatccccgtccacatggtcgagatcatc
aacaagctcgcccgcgtgcagcgccagatgctccaggacctcggccgggagcccactccg
gaggagctgggcaaggaactcgacatgacccccgagaaggtcatcgaggtccagaagtac
ggccgcgagccgatctccctgcacaccccgctgggtgaggagggcgacagcgagttcggt
gacctcatcgaggactccgaggcggtcgtgccggcggacgcggtctcgttcaccttcctc
caggagcagctccagtcgatcctgggcacgctctcggagcgcgaggcgggcgtggtctcg
atgcgctacggcctcaacgacggccagccgaagaccctcgacgagatcggccgcgtgtac
ggggtcacccgtgagcgcatccgccagatcgagtcgaagaccatgtcgaagctccgccac
ccgtcgcgctcgcaggtcctgcgcgactacctcgactga

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