Sphingobium sp. YBL2: TZ53_00020
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Entry
TZ53_00020 CDS
T03855
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
syb
Sphingobium sp. YBL2
Brite
KEGG Orthology (KO) [BR:
syb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
syb02000
]
TZ53_00020
Transporters [BR:
syb02000
]
Other transporters
Pores ion channels [TC:
1
]
TZ53_00020
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
AJR22411
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All DBs
Position
3283..6108
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AA seq
941 aa
AA seq
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MALKPLAFTSASLLALMLAGTAHAQSAAAPQDEEANDIIVTGVRASIVGALNVRKESTQI
VDSIVAEDVGKLPDNNVVEALQRVTGIQVTNRTGGEAAAISIRGLPDALTTLNGRNIFTA
AGQAFALQDVSANLVKRVDVFKTRSADQIETGLAGQVNVETRRPFDFDGFAISGLARGIY
NEQADSYNPNVALLVSDRWETGIGDIGLLVNGSYSRTKYRDQTVTAGAFVPFATMDPATG
TGLTPFQRIFPAGRDPITGQFVVAPALGAWDPGLDRGLPTATGSTMLVNGVETPYYLSRD
AVFSSDLYGERERPSFNVALQWAPNSSSVYTAEVFYAGFRGETFNSLQFSFVDFWDNPQA
PTLYDGTNIVKSRVANNVYGFNSGDFTKTSTDSFVYALNGKWDLGDRGKIVGDIAYQTSK
VKTSFIAMRTDRVASQITTDFNAGGGIPSYHFSDDSLLNDTGIWNVAQLYDNANRDKGSA
ITGTLDGYYTWDEGFLRQIKAGIRIDQRKASTAVRTQDAGAPLAATTLAGLGEGAAFTNS
DFYQGRADVPTSWTLANGYWLHDNADTVRGLYGLRTSDQLSLQRVFDIDESTIAAYVQAD
GELSIFGRPLKLQAGVRYVTVDTDYNFFDRYNGGAQTRVSSGSDRFLPSFTARYEIFDNL
RLRFNYGETLRRPNFSDINPNYSLTGDLTNVGYGSGTAGTATLKPTHSKNFDAAIEWYFE
RNSAITLTGFRREINGLVVPLTVMEFIPNNGIVAGATNNFAITRPVNASNGVLKGLELGL
TYFPSYLPGPLDGLGFVGSVTVLDSKQNIPQTDAAGNVTGQATSSFFGVSDLSYNATLAY
DNGPIGARLSYIWRKEFLANNEARLFANPIGVWRNPEKSLDFQLTWNVNDRLGVTFDAVN
LTKSKQQTYYKFEDVGGPEQYNLGTTLLARTFALGVRYTFK
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atggctttgaagccgctcgctttcacgtctgcatccctgctcgcgctcatgttggcgggc
acggcccatgcccaatccgcagcagcgccgcaggatgaagaggccaacgacatcatcgtc
acgggcgtccgcgcctcgatcgtgggcgcgctcaacgtccgcaaggaatcgacccagatc
gtcgactcgatcgtcgcggaggatgtcggcaagctgccggacaacaacgtcgtcgaagcg
ctccagcgcgtcaccggcatccaggtgaccaaccgcaccggcggcgaagcggcggcgatc
tccatccgcgggctgcccgatgcgcttaccacgctcaacggacgcaacatcttcaccgcc
gccggccaggctttcgcgttgcaggacgtgtccgccaacctcgtgaagcgcgtcgatgtg
ttcaagacccgctccgccgaccagatcgagaccggccttgccggacaggtcaatgtcgaa
acccgtcgtcccttcgacttcgacggcttcgccatttccggccttgcccgcggcatctac
aatgaacaggccgacagctataacccgaacgtcgcgctgctggtcagcgaccgctgggaa
acgggcatcggcgacatcggcctgctggtgaacggcagctacagccgcaccaaatatcgc
gaccagaccgtgacggcgggcgccttcgtgccgttcgcgacgatggacccggcgacgggc
accggcctgacgccgttccagcgcatcttccccgccgggcgcgatccgatcaccggccag
ttcgtcgtcgcccccgccctcggtgcgtgggaccccggcctggaccgcggcctgcccacg
gcgaccggctccaccatgctcgtcaacggcgtcgaaaccccctattatctgtcgcgcgac
gcggtgttcagctccgacctttacggcgagcgggaacgtccgtccttcaatgtcgcgctg
caatgggcgcccaacagcagttcggtctatacggccgaggtcttctacgccggcttccgg
ggcgagaccttcaacagcctgcagttcagcttcgtcgacttctgggacaatccgcaggcg
ccgacgctctatgacggcaccaacatcgtcaagtcgcgcgtcgccaacaatgtctacggc
ttcaacagcggcgacttcaccaagacctcgaccgacagcttcgtctatgcgctgaacggc
aagtgggatctgggcgaccgcggcaagatcgtcggcgacatcgcctatcagaccagcaag
gtgaagacctccttcatcgcgatgcgcacggaccgcgtcgccagccagatcaccacggat
ttcaatgccgggggcggcataccgtcctatcatttcagtgacgacagcctgctgaacgac
accggcatctggaacgtcgcacagctctacgacaatgcgaaccgggacaagggcagcgcc
atcaccggcacgctcgacggctattacacctgggacgagggcttcctgcgccagatcaag
gcaggcatccgcatcgaccagcgcaaggcgtcgaccgccgtgcgcacccaggacgccggc
gcgccgctggccgcgaccacgctggcggggctgggcgaaggcgcagccttcaccaattcg
gacttctaccagggccgcgccgacgtgccgacgagctggacgctcgcgaacggctactgg
cttcacgacaatgcggacacggtgcgcggcctctacggcctcaggacatccgaccagctc
tcgctccagagggtgttcgacatcgatgaaagcaccatcgccgcctatgtgcaggccgat
ggcgaactgtcgatcttcggccgcccgctgaagctgcaggccggtgtccgctacgtcacg
gtcgacaccgactataatttcttcgaccgctacaatggcggcgcgcagacccgcgtctct
tcgggttcggatcgcttcctgcccagcttcaccgcgcgctacgagattttcgacaatctg
cgcctgcgcttcaactatggcgaaacgctgcgacgcccgaacttcagcgacatcaacccc
aattattcgctgaccggcgacctcaccaatgtcggctatggcagcggcacggcgggcacg
gcgacgctgaagcccacccattcgaagaatttcgacgccgcgatcgaatggtatttcgaa
cgcaacagcgcgatcacgctgacgggcttccgccgcgagatcaacgggctggtggtgccg
ctgacggtgatggaattcatccccaacaacggcatcgtcgcgggcgcgaccaacaatttc
gccatcacccggccggtcaacgcctccaacggcgtgctcaagggcctggaactggggctc
acctatttcccgagctatctgccgggtccgctggacgggctgggcttcgtgggcagcgtg
acggtgctggattccaagcagaacattccgcagacggatgctgcgggcaatgtcaccggt
caggcgacctcgtccttcttcggcgtgtcggacctcagctacaacgccacgctcgcctat
gacaacggcccgatcggcgcgcgcctgtcctatatctggcgcaaggagttcctggcgaac
aacgaagcccgcctgttcgccaacccgatcggcgtttggcgcaacccggaaaagagcctg
gacttccagctcacctggaacgtcaacgaccgtctgggcgtgactttcgacgcggtgaac
ctcaccaagtccaagcagcagacctattacaagttcgaggatgtcggcggtcccgagcaa
tataatcttggcacgaccctgctggcgcgcaccttcgcgctcggcgtccgctacaccttc
aagtga
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