Sphingobium sp. YBL2: TZ53_00535
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Entry
TZ53_00535 CDS
T03855
Name
(GenBank) hypothetical protein
KO
K14057
LysR family transcriptional regulator, regulator of abg operon
Organism
syb
Sphingobium sp. YBL2
Brite
KEGG Orthology (KO) [BR:
syb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
syb03000
]
TZ53_00535
Transcription factors [BR:
syb03000
]
Prokaryotic type
Helix-turn-helix
LysR family
TZ53_00535
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
PilJ
HTH_50
HTH_28
HTH_23
Motif
Other DBs
NCBI-ProteinID:
AJR22498
LinkDB
All DBs
Position
complement(111888..112805)
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AA seq
305 aa
AA seq
DB search
MKLSHLRDVVAVAEAGSLRAASRRLGITQPTITRSIRDTENELGVSLFTRHANGVSPTPL
GKLFVRRALAIQSELRRAHEELEQAKGNFVGEVSVALSSASGLALMPSILGPFRASYPRA
LLKLTESLFQPIEHDILTGEIDFYVGPLDEHLSAATLLVEKIFDNKRMVVARKGHPLAHA
TRLAELRDAQWVRPSFSTQYGEVEFETMFENAGLTEPEVVVHCQSALMTLLAVANSDLLT
VLPMQWLDFAPSREGLQTIGLVDSLYAAPICIVRRADVPLTPLAERLCDLTRKAGHNYHR
RNLGL
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgaagcttagtcatctccgcgacgtcgtcgccgtcgccgaagccggaagcctgcgcgcg
gccagccgccggctgggcatcacccagcccaccatcacgcgcagcatacgcgatacggag
aatgagcttggcgtctcgcttttcacgcgccatgccaatggcgtgtcgccgacccccctc
ggcaagctcttcgtgcgccgcgcgctggcgatccagtccgaacttcggcgcgcgcatgag
gagttggagcaggccaagggcaatttcgtcggagaggtttcggtcgcattgtcctccgcg
tccggcctggcgctgatgccgtccattctgggaccgtttcgggcaagctatccccgtgcc
ctgctgaaactcaccgaaagcctcttccagccgatcgaacatgacatcctcaccggtgaa
atcgacttttacgtagggccgctggacgagcatctgtccgccgccaccttgctggtggaa
aagattttcgataacaagcgaatggtcgtcgcgcgaaagggtcatccattggctcacgcg
acaaggctcgcggaactgcgcgatgcccagtgggtccgcccttccttctcgacccaatat
ggcgaagtcgagtttgagacgatgttcgaaaatgcgggcctgacggagccggaggttgtc
gtccactgccagtccgcgctgatgacgttgcttgcggtcgccaattcggatctcttgacg
gtgctcccgatgcagtggctcgattttgcgcccagcagggaaggtttgcagacgatcggc
ctcgttgacagcctctatgcggcgccgatctgtatcgtccgccgcgcggacgtgccgctg
actccgcttgccgaaaggctctgcgacctgacccgcaaggcagggcataattaccaccgg
cgcaatttggggctctag
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