Sphingobium sp. YBL2: TZ53_00595
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Entry
TZ53_00595 CDS
T03855
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
syb
Sphingobium sp. YBL2
Pathway
syb03030
DNA replication
syb03430
Mismatch repair
syb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
syb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TZ53_00595
03430 Mismatch repair
TZ53_00595
03440 Homologous recombination
TZ53_00595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
syb03032
]
TZ53_00595
03400 DNA repair and recombination proteins [BR:
syb03400
]
TZ53_00595
Enzymes [BR:
syb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
TZ53_00595
DNA replication proteins [BR:
syb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
TZ53_00595
DNA repair and recombination proteins [BR:
syb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
TZ53_00595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DUF5710
Motif
Other DBs
NCBI-ProteinID:
AJR22507
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All DBs
Position
complement(128137..129012)
Genome browser
AA seq
291 aa
AA seq
DB search
MNAVHDRHAHAAELLGAHPDFRVQRRLMPVPAFHEAVPFVPSRIGVVIDVETTGLNHDAD
RIIELAVQRFRFDARGRIIQVGTPRVWREDPAMPLDPRITMLTGLTAEDLAGQAIDDAAA
VDILASADIVVAHNAAFDRPFVDRRLPAIAGKPWACSMAELDWLELGFEGRALAHLISQC
GWFYEGHRAENDILALLYLLSHGMPDGDTILAKLIACSEQPTWRVNAIDAPFDAKDRLKA
RGYRWDAALRFWWKSIGQGEADAERGWLLSEVYGGYGEPAFIPVTACERHR
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccgtccatgatcgccatgcacatgcggccgaattgttgggcgcacatcctgac
ttccgtgtgcagcgacgcctcatgccggtaccggcgttccatgaggcggtcccattcgtc
ccgagccggattggcgtcgtgatcgacgttgagacaaccgggctgaaccacgatgcggat
cgcatcatcgaactggctgtccagcgcttccggttcgacgcacgggggcgcatcatccag
gtaggcacgccccgcgtctggcgtgaggatccggccatgccgctggaccccaggatcacg
atgcttaccggcctgacggcggaagaccttgcaggtcaggctatcgacgatgctgcggcc
gtggacatacttgcctctgccgacatcgtcgttgcccataatgccgcttttgatcgaccg
tttgtcgatcgtcgcctgccggccattgccggcaagccatgggcctgttcaatggccgaa
ctggactggctcgagcttggtttcgaggggcgggcacttgcgcatctcatttcgcaatgt
ggatggttctacgagggacatcgggccgaaaacgacatactcgcccttctgtatctgctt
tcgcacggaatgccggacggcgacacgatccttgcaaagctcattgcttgctcggagcag
ccaacctggcgcgtcaacgccatcgatgcgcctttcgatgccaaggatcgtctgaaagcg
cgagggtatcgctgggatgctgccttgcgcttctggtggaagagtatcggccaaggggag
gcagatgccgagcgcggctggctgctcagtgaggtttatggtggatatggcgaaccagcg
ttcatacccgtcacggcctgcgagcggcatcgataa
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