Sphingobium sp. YBL2: TZ53_00935
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Entry
TZ53_00935 CDS
T03855
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
syb
Sphingobium sp. YBL2
Pathway
syb00470
D-Amino acid metabolism
syb00550
Peptidoglycan biosynthesis
syb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
syb00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
TZ53_00935
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
TZ53_00935
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
syb01011
]
TZ53_00935
Enzymes [BR:
syb01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
TZ53_00935
Peptidoglycan biosynthesis and degradation proteins [BR:
syb01011
]
Precursor biosynthesis
Amino acid ligase
TZ53_00935
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Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
2-Hacid_dh_C
ADH_zinc_N
Motif
Other DBs
NCBI-ProteinID:
AJR22565
UniProt:
A0A0C5XE45
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All DBs
Position
complement(193437..194762)
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AA seq
441 aa
AA seq
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MGIVSDVFAGRKYAVLGLARSGLATVECLAASGAEVVAWDSRDEARASVKGKAELADPTE
IDLKGFDGVVVSPGVPLNKHPIAMHAKLAGVPVIGDIELFALARPSLPRHRVVGITGTNG
KSTTTALVHHIVETAGIPTRMGGNIGLPIMGQDPLPEGGVYVLELSSYQIDLTGSLDCDV
AVLLNITPDHLDRYNGFEGYVASKARLFAMQSAGHAAVIATEDEPSRGIFHSVRHSRQGG
NDGVVEVRSSDIAPSAQAGWPALQGPHNAQNAAVAIAVARALGIGEATIEQGLQSYASLP
HRMQRVRELNGVLYVNDSKATNAASTAPALAAYPPVDGRKRLHWIVGGLAKTDNLDECAP
WFANVAQAYTIGEAGPMFAELLRPHMAVDDSEMLSAAVRRAARVAQPGDVVLLSPACASF
DQFRDFEARGDAFAAAVAALE
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atggggatcgtttccgacgtctttgcaggcaggaaatatgcggtgctggggttggcgcgg
tccggcctcgccacggtcgagtgcctggcggcgagcggggctgaggtcgtggcatgggac
agccgggacgaggcgcgcgcctccgttaagggcaaggcggagttggccgatcccaccgaa
atcgacctcaagggcttcgacggcgtggtggtgtcgcccggcgtgccgctcaacaagcac
cccatcgccatgcatgcgaagctcgcgggggtgccggtcattggcgacatagagctgttc
gcgctcgcccggcccagcctgcccaggcatcgggtggtggggatcaccggaaccaacggc
aagtccaccacgaccgctctggtccatcatatcgtcgagacggcgggcattcccacgcgg
atgggcggcaatatcgggctgccgatcatgggacaggacccgttgccggagggcggcgtc
tatgtgctggaactgtcgagctaccagatcgacctgacgggcagcctggattgcgacgtg
gcggtgctgctcaacatcacgccggatcatctcgaccgttataatggctttgaaggctat
gtagcctccaaggcgcggctgtttgcgatgcagtcggccgggcatgccgcggtaatcgcg
acggaagatgagccgagccgggggatattccattccgtccgtcattcccggcaaggcggg
aatgacggggttgtggaggtgcgatcgagcgacatcgctccctccgctcaggccggctgg
cccgcattgcaaggcccgcataacgcccagaacgccgccgtcgccatcgcggtcgcccgc
gcgctgggcatcggcgaagcgacaatcgaacagggcctgcaaagctatgccagccttccc
caccggatgcagcgggtgcgggaactgaacggcgtcctctacgtcaacgacagcaaggcg
accaacgccgcctcgaccgcgccggcgctggccgcctatccgccggtcgatggccgcaag
cggctgcactggatcgtcggcggcctggccaagaccgacaatctggacgagtgcgcgccc
tggttcgccaatgtggcccaggcctataccatcggcgaagcgggccccatgttcgctgag
ctgttgcgcccgcatatggcggtggacgattcggaaatgctatcggccgccgttcgccgc
gctgcgcgggtggcgcagccgggtgacgtggtgctgctgtcgccagcctgcgcgagtttc
gaccagttccgcgatttcgaggcgaggggcgatgccttcgccgctgccgtcgccgcgctg
gaataa
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