Sphingobium sp. YBL2: TZ53_00945
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Entry
TZ53_00945 CDS
T03855
Name
(GenBank) UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase
KO
K01929
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:
6.3.2.10
]
Organism
syb
Sphingobium sp. YBL2
Pathway
syb00300
Lysine biosynthesis
syb00550
Peptidoglycan biosynthesis
syb01100
Metabolic pathways
syb01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
syb00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
TZ53_00945
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
TZ53_00945
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
TZ53_00945
Enzymes [BR:
syb01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
TZ53_00945
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Paralog
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Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
AJR22567
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Position
complement(195841..197217)
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AA seq
458 aa
AA seq
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MSALWTSEEIAQATGGVASAPFAVSGVAFDSREVTGGDLFVAMKGEATDGHRFVDKAFGQ
GAAGAIVSQPIAQPHVLVPDSAAALEDLGRASRARMQGKVVGVTGSVGKTGTKEALFHAL
DRICPGEVHRSVKSYNNHVGVPLSLSRMPRESAFGVFEMGMNHAGELAALTRQVRPHVAI
VTAIAPAHIEFFGTEEKIAEAKAEIFEGLEPGGTAVIPYDSPHVATLYAKAEKHAARILT
FGFDPEADVRARETVPAVGGGTLVTAALPGVELCFTVGAPGEHWVSNALAVLATVEALGG
DLAAAGLALAEMPGLPGRGQRSILPVEGGEALLIDESYNANPLSMTATLRQLGREQAERR
IAVLGGMRELGDRSRELHAGLVEPLTAGQVDYAVLVGEEMEPLAQALGGVIAFDHVSDAA
SATDLIRHEIRAGDAVLVKGSNGIGLSRLVAALQEAKN
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcactctggacctccgaagagattgcgcaggccacggggggcgtcgcttcggcg
cccttcgccgtttctggcgtggcgttcgacagccgcgaagtgacgggcggcgacctgttc
gtcgcgatgaagggcgaggccacggatggccatcgcttcgtcgacaaggcgttcggtcag
ggcgcggcgggcgccatcgtcagccagccgatcgcgcagccgcatgtgctggtgcccgac
agcgcggcggcgctggaggatcttggtcgcgcctcccgcgcgcggatgcagggcaaggtg
gtcggcgtcaccggatcggtgggcaagaccggcaccaaggaggcgctgttccatgcgctc
gaccgcatctgtccgggggaggtccaccgctccgtcaagagctacaacaatcatgtcggc
gtgccgctgagcctgtcgcgcatgccgcgcgaatccgcctttggcgtgttcgaaatgggc
atgaaccatgccggcgagctggcggcgctgacccggcaggtgcggccgcatgtcgccatc
gtcaccgccatcgcgccggcccatatcgaatttttcggcaccgaggagaagatcgcggag
gccaaggccgagattttcgaggggctggagccgggcggcacggcggtcatcccctatgac
agcccgcatgtcgcgaccctttatgccaaggcggagaagcatgcggcacgaatcctgacc
ttcggcttcgatccggaggccgatgtccgcgcccgcgaaaccgtgcctgcggtgggcggc
ggcacgctggtcacggcggcgctgccgggcgtcgaactgtgcttcaccgtgggggctccg
ggcgaacattgggtttccaacgctctggcggtgctggcgacggtggaggcgctgggcggc
gatctggcggcggcgggactggcgctggcggaaatgccgggccttccgggtcggggtcag
cggagcatcctgcctgtcgagggcggcgaggcgttgctgatcgacgaaagctataacgcc
aatccgttgagcatgacggcgacgctcaggcaattgggccgggagcaggcggagcgccgc
attgccgtgctgggcgggatgcgcgaactgggcgaccgcagccgcgaattgcatgccggg
ctggtcgaaccgctgacggcgggccaggtggattatgcggtgctggtgggcgaggagatg
gagccgctggcgcaagcgctgggcggcgtcatcgccttcgaccatgtatccgacgcagcc
agcgccaccgacctcattcgacatgaaatacgcgcgggcgatgcggtcctggtgaaggga
tcgaacggcatcggcctctcgcgcctcgtcgccgcgctacaggaagcaaagaactga
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