Sphingobium sp. YBL2: TZ53_01100
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Entry
TZ53_01100 CDS
T03855
Name
(GenBank) isopropylmalate isomerase
KO
K01703
3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:
4.2.1.33
4.2.1.35
]
Organism
syb
Sphingobium sp. YBL2
Pathway
syb00290
Valine, leucine and isoleucine biosynthesis
syb00660
C5-Branched dibasic acid metabolism
syb01100
Metabolic pathways
syb01110
Biosynthesis of secondary metabolites
syb01210
2-Oxocarboxylic acid metabolism
syb01230
Biosynthesis of amino acids
Module
syb_M00432
Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate
Brite
KEGG Orthology (KO) [BR:
syb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00660 C5-Branched dibasic acid metabolism
TZ53_01100
09105 Amino acid metabolism
00290 Valine, leucine and isoleucine biosynthesis
TZ53_01100
Enzymes [BR:
syb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.33 3-isopropylmalate dehydratase
TZ53_01100
4.2.1.35 (R)-2-methylmalate dehydratase
TZ53_01100
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Motif
Pfam:
Aconitase
Motif
Other DBs
NCBI-ProteinID:
AJR22591
UniProt:
A0A0C5XD00
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Position
complement(223069..224523)
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AA seq
484 aa
AA seq
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MVKPRTLYEKIWDAHVVERRPDGTCLIYIDRHLVHEVTSPQAFEGLRIAGRKVRRPELTL
AVPDHNLPTTARRDAAGRRIPIADPESAQQLAALERNAPEFGVRLIGDADPEQGIVHVVG
PEQGFTLPGTTLVCGDSHTSSHGALGALAFGIGTSEVEHVLATQTLLLKQSKTMEVVVEG
ELGYGVTPKDVALAICGRIGTAGGTGYVMEYRGSVFRDMSIEGRLTVANMSIEAGARSGL
FAPDEKTFAYLEGRPMAPRGAEWDAAVAYWKTLATDEGAVFDKSVVIDAADIVPSVTWGT
SPEDVVPVTGVVPDPESFADASKRAAAQKSLDYMGLSAGQRMEDVAIEHVFIGSCTNSRI
EDLRAAAGLLKGRRIASGIKHAMVVPGSGLVKRQAEAEGLDRIFTEAGFEWREPGCSACL
GMNPDKVPAGERCASTSNRNFMGRQGPGSRTHLVSPVMAAAAAITGHLTDVRELMGEKRG
EAVA
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atggtcaagccccgcacactctatgagaagatctgggacgcgcatgtcgtcgagcgccgt
cccgatggaacctgcctgatctacatcgatcgccatctcgtgcatgaggtgacgagtccc
caggcgttcgaggggctgcggatcgccgggcgcaaggtgcgccgtcccgaactgacgctg
gcggtgccggatcataacctgccgaccacggcgcggcgcgacgccgcgggccgccgcatt
cccattgccgatccggaaagcgcgcagcagcttgcggcgctggagcggaacgcgccggaa
ttcggcgtccgcctgatcggggatgcggaccccgaacagggcatcgtgcatgtcgtcggg
ccggagcagggcttcaccctgccggggacgactttggtctgcggcgacagccataccagc
tcgcacggcgcgctgggggcgttggccttcggcatcggcacgtcggaggtcgagcatgtg
ctcgccacccagacgctgctcctgaagcagtccaagaccatggaagtcgtggtcgagggc
gaattgggctatggcgtcacgcccaaggatgtcgcgctggcgatctgcgggcggatcggc
acggcgggcggcaccggctatgtcatggaatatcgcgggtcggtgttccgcgacatgtcg
atcgagggacggctgaccgtcgccaacatgtcgatcgaggccggcgcgcgctccggcctg
ttcgcgcctgacgaaaagactttcgcttatctggaaggccgcccgatggcccccaggggc
gcggagtgggatgccgccgtcgcctattggaagacgctggcgacggacgaaggcgcggtg
ttcgacaagagcgtggtcatcgacgccgctgacatcgtgccgagcgtcacctggggcacc
agccccgaagatgtcgtgccggtcactggcgtggtgcccgatccggaaagctttgccgac
gcctccaagcgcgcggccgcgcagaagtcgctcgactatatgggcctctccgccggacag
cggatggaggatgtggcgatcgaacatgtcttcatcggcagttgcaccaacagccggatc
gaggatctgcgcgccgccgctggcctgctgaagggccgccggatcgccagcggcatcaag
catgccatggtcgtgcccggttccgggctggtcaagcgccaggcggaagccgaaggcctg
gaccgcattttcaccgaagccggtttcgaatggcgggagccgggctgctccgcctgcctg
ggcatgaacccggacaaggtgcccgccggcgagcgctgcgcatccaccagcaaccgcaat
ttcatgggccggcaggggccggggtcgcggacgcatctcgtctcgcccgtcatggctgcc
gctgccgcgatcaccggacatctcacggacgtacgcgaactgatgggtgaaaaaagggga
gaggcggtcgcatga
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