KEGG   Sphingobium sp. YBL2: TZ53_01310
Entry
TZ53_01310        CDS       T03855                                 
Name
(GenBank) diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
syb  Sphingobium sp. YBL2
Pathway
syb00300  Lysine biosynthesis
syb00470  D-Amino acid metabolism
syb01100  Metabolic pathways
syb01110  Biosynthesis of secondary metabolites
syb01120  Microbial metabolism in diverse environments
syb01230  Biosynthesis of amino acids
Module
syb_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:syb00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    TZ53_01310
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    TZ53_01310
Enzymes [BR:syb01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     TZ53_01310
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N
Other DBs
NCBI-ProteinID: AJR22625
LinkDB
Position
complement(268003..269283)
AA seq 426 aa
MDHFTYVDGAMLVEQVPMAEIAAQVGTPVYIYSTATLTRHVGVFREGLSQLDDPLIAFAV
KANPNAAVLATLAKLGLGADVVSVGELLRAMAAGIPADRIVFSGVGKTADEMRIALEKGI
YQFNLESEPEAEMLSEVALSMGKRAPVAYRINPDVDAGTHAKISTGKSENKFGIPYDRAL
ASYAAARGLPGLDVQGVAVHIGSQLTDLAPLEAAFAKVGALIERLRGEGHDIRTADLGGG
LGVPYDPSQPLPPSPADYGAMVTKVTQGWNVRLMFEPGRLIVGNAGVLLSQVVRVKQGAQ
APFVIVDAAMNDLLRPSLYDAWHDIRAVQPKGERAAANVVGPVCETGDTFAMHRDMDVVG
AGDLVAFMTAGAYGATMASTYNSRALTPEVLVSGDKWAVVRARPPVEALIEGDSIPAWVA
SKDVQD
NT seq 1281 nt   +upstreamnt  +downstreamnt
ttggaccattttacctatgtcgacggcgcgatgctggtggagcaggtgccgatggcggag
atcgccgcgcaggtcggcacgcccgtctacatctattcgaccgcgaccctgacccgccat
gtcggcgtgttccgcgaaggactgtcgcagcttgatgatccgctgatcgccttcgcggtg
aaggccaatcccaacgccgccgtgctggcgacgctggcgaagctgggcctcggcgccgac
gtcgtgtcggtgggcgaattgctgcgcgccatggcggcgggcattccggcggaccgcatc
gtcttttcgggcgtcggcaagacggccgacgaaatgcgcatcgcgctggaaaagggcatc
taccagttcaatctggaaagtgagcccgaagcggaaatgctctccgaagtggccctgtcg
atggggaagagggcgccggtcgcctatcgcatcaaccccgatgtcgacgcgggaacccat
gccaagatctcgaccggcaagtcggaaaacaagttcggcatcccctatgaccgggcgctg
gccagctatgccgcggcgcgcggcctccccggcctcgacgtgcagggcgtggcggtgcat
atcggcagccagctcaccgatctcgcgcccctggaagccgccttcgccaaggtcggcgcg
ctgatcgaaaggctgcgcggcgaaggccatgacatccgcaccgccgatctcggcggcggg
ctgggcgtgccctatgatccctcgcagccgctgccgcccagccccgccgactatggcgcg
atggtgacgaaggtgacgcagggctggaacgtccgcctgatgttcgagccgggccgcctg
atcgtcggcaatgcgggcgtgctgctgtcgcaggtggtgcgggtgaagcagggcgcgcag
gcccccttcgtgatcgtcgacgcggcgatgaacgacctgctgcggcccagcctctacgac
gcctggcacgacatccgcgccgtgcaaccgaagggcgagcgcgccgccgccaatgtggtg
ggcccggtgtgcgagacgggcgacaccttcgccatgcaccgcgacatggatgtggtgggg
gcgggcgatctggtcgccttcatgaccgccggggcctatggggcgaccatggcgagcacc
tataacagccgcgcgctgacgcccgaagtgctggtgtcgggcgacaaatgggccgttgtc
cgcgcccgtccgccggtcgaggcgctgatcgagggggacagcattccggcctgggtagcg
tcgaaggatgtgcaggactga

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