Sphingobium sp. YBL2: TZ53_01850
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Entry
TZ53_01850 CDS
T03855
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K02034
peptide/nickel transport system permease protein
Organism
syb
Sphingobium sp. YBL2
Pathway
syb02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
syb00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
TZ53_01850
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
syb02000
]
TZ53_01850
Transporters [BR:
syb02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
TZ53_01850
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
OppC_N
Motif
Other DBs
NCBI-ProteinID:
AJR22713
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Position
375026..375853
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AA seq
275 aa
AA seq
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MKRRSLLRRAGALPLSGKIGLALVGFWILAAILGPLVAPYPPGAFVSEEVFAGSTSQFWF
GSDFLGRDVLSRLLVGARLTMGLSAIAVAIAVALGTGLALTAAVGPRWLDELLSRAMDTL
ISIPSKIFALVLVAAFGSSVLLLTLIVAITYVPGNFRIARSLAVGLARLDYVEVARARGE
GRIHIALVEMLPNMIRPLCADIGLRFVFIVLLLSGLSFLGLGLQPPEADLGALVRENVSG
LAEGALAIMAPAVAIASLTVGVNLLIDAATQGNVK
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgaagatcgctccttcgccgcgccggcgccttgcccctttcgggcaagatcggg
cttgcgcttgtcggcttctggatcctcgcggcgatcctcggcccccttgtcgctccctac
ccgccgggtgcgttcgtcagcgaagaggtcttcgccggttcgaccagccaattctggttc
ggcagcgatttcctgggccgcgacgtgctaagccgtctgctggtgggggcgcgccttacc
atggggctgtccgcgatcgcggtcgccatcgcggtcgcgctcgggaccgggctggccttg
acagcggcggtcggtccgcgctggctcgacgagctcctgtcacgcgcaatggataccttg
atatcgattcccagcaagatattcgcgctggtgctggtcgcggccttcggatcgtcggtg
ctgctgttgacgctgatcgtcgcgattacctatgttccaggtaacttccggatcgcgcgt
tcgctcgcggttgggctggcccggctcgattatgtggaggtcgcgcgcgcgcgcggcgaa
gggcggattcacatcgcgctggtcgaaatgttgccgaacatgatccggccgctatgcgcc
gatatcggattgcggttcgtcttcatcgtgctgctgctgtctggcttgagcttcctgggc
ctcggcctgcaaccgcccgaggccgacctgggggcgctcgtgcgcgaaaatgtttctggt
ctggccgagggcgcgcttgccatcatggcgccggcggtggcgatcgccagcctgacggtg
ggcgtcaacctgctgatcgatgcagccacgcaggggaatgtgaagtga
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