Sphingobium sp. YBL2: TZ53_01920
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Entry
TZ53_01920 CDS
T03855
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
syb
Sphingobium sp. YBL2
Brite
KEGG Orthology (KO) [BR:
syb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
syb02000
]
TZ53_01920
Transporters [BR:
syb02000
]
Other transporters
Pores ion channels [TC:
1
]
TZ53_01920
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
AJR22723
LinkDB
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Position
388821..390983
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AA seq
720 aa
AA seq
DB search
MRMSSVRRLGFLAGSAAIALSATLSPAALAQEPADPASDSTIVVTGLKRQYFGDTPVKEI
PQAVQFLEGKLLDDLNITRLDTALELASGVSRQNNFGGLWDSFAIRGFAGDENFPSGFLV
NGFNGGRGYGGPRDASNVERIEILKGPNSALFGRGEPGGTVNIVTKKPTFKEGGSFAISA
GSWETYRVEADYNLPLSDSVAVRINGSSEQAESFRDTVNTQKYTLTPSFLAKLSDADIFT
YELEYVNQEVPFERGVVAIPTVNANGSISYNLGAIPNSRFLGNPNDGPVKVEVLGHQAQY
QHDFSADWTLMLGAGYKDTTFEGFSSDPELVLSRQRLDNDGRTLTRQRRYRDYSTTHMVF
RGELSGKVNTGSIVHNIRIGADWDRFKIKTYQTRYRPIASDQSYAIDIFNPNYNIPAPTP
GTVIQNATEIQKAWGIYAQDQIEITEQFKIRFGGRYDDFSQDIDLRLNNTNPRKSYTKFS
PMAGLVFEPVSSLSFYASYGKGFRPNSGVGFDGNPFAPEISKSYEVGAKFMTADGRITST
LSLYKMKKDNVLTTDPANAGFSKPVGSAKSKGIEFDLNAKLPAGFELFLTYAYTDAEWAT
NALDPNFGFQILKGDPLINIPKHQGNALLFKNFSIGDHEAMLGAGVNHVGRRLGETATTF
FLPSYTIAKVLGSFNITDQIKLSADVNNLFNKKYYASSYAALWVAPGTPRQFTVRASFNF
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatgtcatcggtccgccgccttggcttcctcgcgggctccgccgccatcgccctg
tctgccacgctttcgcccgccgctctggcgcaagagccggcagacccggcctccgacagc
accatcgtggtcaccggcctcaagcggcaatatttcggcgatacgccggtcaaggaaatt
ccccaggcggtgcagttcctggaaggcaaactgctcgacgatctcaacatcacccgcctc
gacaccgcgctcgaactggcgagcggcgtgtcgcgccagaataattttggcggcctttgg
gacagtttcgcgatccgcggctttgcgggcgacgagaatttcccgagcggctttctggtc
aacggcttcaacggcggacgtggctatggcggtccgcgcgacgcgtcgaacgtcgaacgg
atcgagattctgaaaggccccaactcggcgttgttcgggcgcggcgagccgggcggcacg
gtcaacatcgtgaccaagaaaccgaccttcaaggaaggcggcagcttcgccatatccgca
ggtagctgggagacataccgggtcgaagcggactataacctgccgctgtcggacagcgtc
gcggtgcggatcaacgggtcgtccgagcaggcggaaagcttccgcgacacggtcaacacg
cagaaatatacgctcaccccgtccttcctggccaagctgtctgatgccgacatcttcaca
tatgaactggaatatgtgaaccaggaggtaccttttgagcgcggcgtggtggcgatcccg
actgtcaacgccaacggctctatcagctataatctgggcgctatccccaacagccggttc
ctcggcaatcccaatgacggcccggtcaaggtcgaggtgctgggccatcaagcgcagtac
cagcatgatttcagcgcggattggacgctgatgctgggtgcgggctacaaggacaccacg
ttcgagggcttttccagcgatccggaactggtgcttagccgacagcggctcgacaatgac
gggcgcaccttgacccgccagcgccgttatcgcgattacagcaccacccatatggtgttc
cgcggggagctcagcggaaaggtcaacacgggatcgatcgtccataatatccgcatcggc
gcggactgggatcgcttcaagatcaagacctaccagacccgctatcgtccgatcgcttcc
gaccagtcctatgcgatcgacattttcaaccccaactacaacattcccgcgcccacgccg
ggaaccgtgatccagaacgcgaccgaaatccagaaggcctggggcatctacgcgcaggac
cagatcgagattaccgagcagttcaagatacgctttggcggccgctatgacgatttcagc
caggatatagatctgcgcctcaacaacaccaatccgcgcaaatcctataccaagttcagc
ccgatggccggcctcgtgttcgagccggtgagtagcctgtccttctacgccagctatggc
aagggcttccgtcccaacagcggcgtgggcttcgacggcaatcctttcgcgccggaaatc
agcaaatcctatgaagttggcgccaagttcatgacggccgacggacgcatcaccagcacc
ctgtcgctctataagatgaagaaggataatgtactgacgaccgacccggccaacgcgggc
ttttccaagccggtggggtcggcaaagagcaagggcatcgagtttgacctcaacgccaag
ctgcccgccgggttcgagctgttcctgacctatgcctataccgatgcggagtgggcgacc
aacgcgctcgatcccaatttcggcttccagatcctcaaaggcgatccgctcatcaacatt
cccaagcatcagggcaatgcgctgctgttcaagaatttctcgatcggggaccatgaggcg
atgctgggtgcgggcgtcaaccacgtcggcaggcggctgggggagacagcgacgaccttc
ttcctgcctagctacaccatcgccaaggtgctgggatcgttcaacatcaccgaccagatc
aagctgtcggcggatgtgaacaacctcttcaacaagaaatattatgccagctcctatgcg
gcattgtgggtcgcgccgggtacgccgcgacagttcaccgtccgcgcgagcttcaacttc
tga
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