Sphingobium sp. YBL2: TZ53_02535
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Entry
TZ53_02535 CDS
T03855
Name
(GenBank) RNA polymerase sigma70
KO
K02405
RNA polymerase sigma factor FliA
Organism
syb
Sphingobium sp. YBL2
Pathway
syb02020
Two-component system
syb02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
syb00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
TZ53_02535
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
TZ53_02535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
syb03021
]
TZ53_02535
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
syb02035
]
TZ53_02535
Transcription machinery [BR:
syb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
TZ53_02535
Bacterial motility proteins [BR:
syb02035
]
Flagellar system
Flagellar assembly proteins
Stator
TZ53_02535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
Sigma70_ECF
Motif
Other DBs
NCBI-ProteinID:
AJR22814
LinkDB
All DBs
Position
complement(523790..524527)
Genome browser
AA seq
245 aa
AA seq
DB search
MFMNRVVAGSDANTYGRSAHANSPERLARQYMPLVRKIAWHVHGRVSSAIEIEDLLQIGM
VALVEAANGFEDRGLGFASYAQMRVRGAMIDHLRRHATMTRSAMSQRKQLGAIRNRLEQK
LGRAPLEAEMSAEMGLDPAAYREVADGCEMVQHSSMDEVYSDQSMWFADVEDRADDVMER
ESLKAALAKCIGDLPQREALVLQLYFVEELNLEEIGATLDIGAARVCQIKKAALDRLREK
LRDWD
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgttcatgaatagggtcgtcgccggttccgacgccaacacctatggccggtccgcccat
gccaactcgcccgaacggctggcgcgccaatatatgccgctggtgcgcaagatcgcctgg
catgtccatggccgggtatcgagcgccatcgagatcgaggacctgctccagatcggcatg
gtcgcgctggtcgaggcggccaatggattcgaggatcggggccttggcttcgcctcctat
gcgcagatgcgcgtgcgcggggcgatgatagaccatctgcgccgccatgcgacgatgacg
cgttccgccatgtcgcagcgcaagcagttaggggccatccgcaaccggctggagcagaag
ctgggccgtgcgccgctggaggcggagatgtccgccgaaatggggctggaccccgccgcc
tatcgcgaagtggcggatggctgcgagatggtgcagcatagcagcatggacgaggtctat
tccgaccagtccatgtggtttgccgatgtcgaggatcgcgccgacgatgtgatggagcgg
gaatcgctcaaagccgcgctcgccaaatgcataggcgacctgccgcagcgggaggcgctg
gtgcttcagctttatttcgtcgaggaactcaatctggaggagatcggcgcgacgctggac
atcggcgcggcgcgggtgtgccagatcaagaaggctgcgctggacaggctgcgcgagaaa
ttgcgggattgggactga
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