KEGG   Sphingobium sp. YBL2: TZ53_02775
Entry
TZ53_02775        CDS       T03855                                 
Name
(GenBank) recombinase RecF
  KO
K03629  DNA replication and repair protein RecF
Organism
syb  Sphingobium sp. YBL2
Pathway
syb03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:syb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    TZ53_02775
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:syb03400]
    TZ53_02775
DNA repair and recombination proteins [BR:syb03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     TZ53_02775
SSDB
Motif
Pfam: SMC_N AAA_21 AAA_23 AAA_15 AAA_22 AAA_30 SbcC_Walker_B ABC_tran AAA_29 AAA_16 AAA_25 AAA_27 AAA_18 nSTAND3 Aq_aa27
Other DBs
NCBI-ProteinID: AJR22854
LinkDB
Position
complement(569988..571058)
AA seq 356 aa
MIGRLTLSDFRNHADALIMPDHSFIVLTGDNGAGKTNILEAVSMLAPGRGLRGAALRDMV
RQDGAGGFGIAAEVDGVMLGTGVLASAPDRRQVRIGGVASSANALADHLSIVWLTPAMDR
LFMDSPGGRRRFLDRLTLALHPAHAAHSARYEAAMRARNRLLNDLSAADPSWLSALETQM
DEHGAALAVARADLVGRLQAALEDQPDHPFARPLLAIEGEGEGDEPLGLRLARERRRDAA
AGRTLSGPHRQDLAVVHAAKAQAAALCSTGEQKALLLSILLAHAALVAAHRGQPPVLLLD
EVAAHLDPSRRAALFDRLRETGGQVWMTGTESALFNGLPVASRFCVTAGHVFRSAD
NT seq 1071 nt   +upstreamnt  +downstreamnt
atgatcggccgtcttaccttgagcgatttccgcaatcatgcggatgcactgatcatgccc
gatcacagtttcatcgtgctgaccggggataatggcgcgggcaagaccaacatattggaa
gccgtgtcgatgttggcgccgggacgcggcctgcgcggcgcggccctgcgcgacatggtc
cggcaggacggggcgggcggtttcggcatagcggcggaagtggacggcgtgatgctgggt
acaggggttctcgcttcggcccccgaccggcgtcaggtgcggatcgggggcgtcgcctcc
tccgccaatgcgctggcggatcatctgtccatcgtgtggttgacgccggccatggaccgg
ctgttcatggacagtcccggcgggcggcgtcgtttcctggaccggctgacgctggcgctt
caccccgcccatgccgcgcacagcgcccgctacgaggcggcgatgcgggcgcgcaaccgg
ctgcttaacgatctgtccgccgccgatccttcctggctgagcgcgcttgaaacgcagatg
gacgagcatggcgcggcgcttgccgtcgcgcgcgccgatctggtcggccgcttgcaggcc
gcgctggaggaccagcccgaccatcccttcgcccgtccgctgctggcgatcgagggggag
ggggagggcgacgagcccctggggcttcgcctggcccgcgaacgccgccgcgatgccgct
gccggtcgcaccttgtccggcccgcaccggcaggaccttgccgtcgttcacgccgccaag
gcgcaggctgctgcgctctgttcgaccggcgagcagaaggcgctgctgctctccatcctc
ctcgcccatgcggctctggtggcggctcatcgcggccagccgccggtgctgctgctcgac
gaagtggcggcgcatctcgacccgtcgcggcgggccgcgctgttcgaccggctgcgggaa
accggcggccaggtctggatgacggggacggaatccgcacttttcaacggcttgcctgtg
gccagccggttttgcgtaacggcggggcacgtctttcgttccgcagattga

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