KEGG   Sphingobium sp. YBL2: TZ53_02945
Entry
TZ53_02945        CDS       T03855                                 
Name
(GenBank) ribonuclease D
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
syb  Sphingobium sp. YBL2
Brite
KEGG Orthology (KO) [BR:syb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:syb03016]
    TZ53_02945
Enzymes [BR:syb01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     TZ53_02945
Transfer RNA biogenesis [BR:syb03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    TZ53_02945
SSDB
Motif
Pfam: DNA_pol_A_exo1 HRDC
Other DBs
NCBI-ProteinID: AJR26130
UniProt: A0A0C5XND9
LinkDB
Position
609236..610402
AA seq 388 aa
MQIHPLITDSKTLAQFCARIAKSPYIAVDTEFMRENSYWPDLCLVQVADEHEAAAIDPKA
PGLDLSPLLDLMVDNEDVLKVFHAGGQDLEIIYNLTGKTPHPMFDTQIAAMALGLGEQIG
YGNLVDAWLGVQLDKGARFTDWARRPLDKRQIDYAIGDVTYLIQIFPKMLEELRRTGRGD
WLDQEMERISDPSNYENRPDEAWQRVRIASRKADVLGRLKALAAWREMEAQDKNLPRGRI
VKDETLADIASHPPRTQEDLGKVRGLSATWKTNDIGNRLMLALAAHKPLAKEEMPERDPK
RPGLGKDGALVADLLKLLLKIRSRDINVAARLIARSDDIDALAAGVREDLAILEGWRYEQ
FGRDAVDLVEGRLAFAVKNGRLKMTRTQ
NT seq 1167 nt   +upstreamnt  +downstreamnt
atgcaaatccatccgctgattaccgacagcaagactctcgcccaattctgcgcccggatc
gccaaatcgccctatatcgcggtcgataccgaattcatgcgcgaaaacagctattggccc
gatctctgcctggtgcaggtcgcggacgagcatgaggcggcggccatcgaccccaaggcg
cccggcctcgacctttcgcccctgctcgacctgatggtcgacaatgaggatgtgctgaag
gtctttcatgcgggcggtcaggatctggagatcatctacaacctgaccggcaagaccccc
catccgatgttcgacacgcagatcgcagcgatggcgctggggctgggcgaacagatcggc
tacggcaatctggtcgacgcctggctgggcgtgcagctcgacaagggcgcgcgcttcacc
gactgggcgcgccggccgctcgacaagcggcagatcgattatgcgatcggcgacgtcacc
tacctgatccagattttccccaagatgctggaggaactgcgccggaccggccgtggcgac
tggctggatcaggagatggagcggatcagcgatccctccaattatgagaacaggcccgac
gaggcctggcaacgcgtccgcatcgccagccgcaaggccgatgtgctgggccgcctgaag
gcgctggcggcatggcgcgagatggaggcgcaggacaagaatctgccacgcggccgcatc
gtcaaggacgagacgctggccgacatcgccagccacccgccgcgcacgcaggaggatctg
ggcaaggtgcgcggcctgtctgccacctggaagaccaacgacatcggcaatcggctgatg
ctcgcccttgccgcgcacaagccgctggccaaggaggaaatgccggagcgcgaccccaag
cggccgggcctgggcaaggatggcgcgctggtggcggaccttctgaagctgctgctgaaa
atccgttcgcgcgacatcaatgtcgccgcgcgcctcatcgcccgcagcgacgacatcgac
gcgctggccgccggcgtgcgggaagacctcgcgatcctggaaggctggcgctatgaacag
ttcggccgcgatgcggtcgacctggtcgagggccgccttgccttcgcggtcaagaacggc
cgcctcaagatgacccgcacgcaatag

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