Sphingobium sp. YBL2: TZ53_02945
Help
Entry
TZ53_02945 CDS
T03855
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
syb
Sphingobium sp. YBL2
Brite
KEGG Orthology (KO) [BR:
syb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
syb03016
]
TZ53_02945
Enzymes [BR:
syb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
TZ53_02945
Transfer RNA biogenesis [BR:
syb03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
TZ53_02945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
AJR26130
UniProt:
A0A0C5XND9
LinkDB
All DBs
Position
609236..610402
Genome browser
AA seq
388 aa
AA seq
DB search
MQIHPLITDSKTLAQFCARIAKSPYIAVDTEFMRENSYWPDLCLVQVADEHEAAAIDPKA
PGLDLSPLLDLMVDNEDVLKVFHAGGQDLEIIYNLTGKTPHPMFDTQIAAMALGLGEQIG
YGNLVDAWLGVQLDKGARFTDWARRPLDKRQIDYAIGDVTYLIQIFPKMLEELRRTGRGD
WLDQEMERISDPSNYENRPDEAWQRVRIASRKADVLGRLKALAAWREMEAQDKNLPRGRI
VKDETLADIASHPPRTQEDLGKVRGLSATWKTNDIGNRLMLALAAHKPLAKEEMPERDPK
RPGLGKDGALVADLLKLLLKIRSRDINVAARLIARSDDIDALAAGVREDLAILEGWRYEQ
FGRDAVDLVEGRLAFAVKNGRLKMTRTQ
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatccatccgctgattaccgacagcaagactctcgcccaattctgcgcccggatc
gccaaatcgccctatatcgcggtcgataccgaattcatgcgcgaaaacagctattggccc
gatctctgcctggtgcaggtcgcggacgagcatgaggcggcggccatcgaccccaaggcg
cccggcctcgacctttcgcccctgctcgacctgatggtcgacaatgaggatgtgctgaag
gtctttcatgcgggcggtcaggatctggagatcatctacaacctgaccggcaagaccccc
catccgatgttcgacacgcagatcgcagcgatggcgctggggctgggcgaacagatcggc
tacggcaatctggtcgacgcctggctgggcgtgcagctcgacaagggcgcgcgcttcacc
gactgggcgcgccggccgctcgacaagcggcagatcgattatgcgatcggcgacgtcacc
tacctgatccagattttccccaagatgctggaggaactgcgccggaccggccgtggcgac
tggctggatcaggagatggagcggatcagcgatccctccaattatgagaacaggcccgac
gaggcctggcaacgcgtccgcatcgccagccgcaaggccgatgtgctgggccgcctgaag
gcgctggcggcatggcgcgagatggaggcgcaggacaagaatctgccacgcggccgcatc
gtcaaggacgagacgctggccgacatcgccagccacccgccgcgcacgcaggaggatctg
ggcaaggtgcgcggcctgtctgccacctggaagaccaacgacatcggcaatcggctgatg
ctcgcccttgccgcgcacaagccgctggccaaggaggaaatgccggagcgcgaccccaag
cggccgggcctgggcaaggatggcgcgctggtggcggaccttctgaagctgctgctgaaa
atccgttcgcgcgacatcaatgtcgccgcgcgcctcatcgcccgcagcgacgacatcgac
gcgctggccgccggcgtgcgggaagacctcgcgatcctggaaggctggcgctatgaacag
ttcggccgcgatgcggtcgacctggtcgagggccgccttgccttcgcggtcaagaacggc
cgcctcaagatgacccgcacgcaatag
DBGET
integrated database retrieval system