Sphingobium sp. YBL2: TZ53_03160
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Entry
TZ53_03160 CDS
T03855
Name
(GenBank) crossover junction endodeoxyribonuclease RuvC
KO
K01159
crossover junction endodeoxyribonuclease RuvC [EC:
3.1.21.10
]
Organism
syb
Sphingobium sp. YBL2
Pathway
syb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
syb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
TZ53_03160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
syb03400
]
TZ53_03160
Enzymes [BR:
syb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.10 crossover junction endodeoxyribonuclease
TZ53_03160
DNA repair and recombination proteins [BR:
syb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
TZ53_03160
RecFOR pathway proteins
TZ53_03160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvC
Motif
Other DBs
NCBI-ProteinID:
AJR22912
UniProt:
A0A0C5XK16
LinkDB
All DBs
Position
648238..648729
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AA seq
163 aa
AA seq
DB search
MIILGLDPGLGTTGWGLIAADGNRLTHISNGQIKTDSGMALASRLLVLDLALTDLILEHQ
PNGAAVEEVFLNVNPQSTLKLGQARGVVLLAASRSGMEVGEYAARLVKKSVVGVGNASKE
QVHAMVSRLLPGAKIAGPDASDALAVAITHAHHLASARRIPRK
NT seq
492 nt
NT seq
+upstream
nt +downstream
nt
atgatcatcctgggcctggacccgggccttggcacgaccggctggggcctgatcgccgcg
gatggcaaccgcctcacccatatctccaacggccagatcaagaccgattcaggcatggcg
ctggccagccggctgctggtgctcgatctggcgctgaccgacctcatcctcgaacatcaa
cccaatggcgcggctgtcgaagaggtgttcctcaacgtgaacccgcaatcgacgctcaaa
ctcggccaggcccgtggcgtggtgctgctggcggcttcgcgatccggcatggaagtgggc
gaatatgccgcccggctcgtcaagaaatccgtggtcggcgtcggcaatgcatcgaaggag
caggtccacgccatggtctcccgcctcctccccggcgcaaagatcgccggacccgatgcc
tcggacgccctggccgtagcgatcacgcacgcccatcatctggccagcgcacgaaggatt
ccgcggaagtag
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