Sphingobium sp. YBL2: TZ53_03190
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Entry
TZ53_03190 CDS
T03855
Name
(GenBank) xanthine dehydrogenase
KO
K11177
xanthine dehydrogenase YagR molybdenum-binding subunit [EC:
1.17.1.4
]
Organism
syb
Sphingobium sp. YBL2
Pathway
syb00230
Purine metabolism
syb01100
Metabolic pathways
syb01120
Microbial metabolism in diverse environments
syb01232
Nucleotide metabolism
Module
syb_M00958
Adenine ribonucleotide degradation, AMP => Urate
Brite
KEGG Orthology (KO) [BR:
syb00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
TZ53_03190
Enzymes [BR:
syb01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.4 xanthine dehydrogenase
TZ53_03190
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Motif
Pfam:
MoCoBD_1
MoCoBD_2
Ald_Xan_dh_C
Motif
Other DBs
NCBI-ProteinID:
AJR22916
UniProt:
A0A0C5XDY6
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Position
complement(656810..659026)
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AA seq
738 aa
AA seq
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MKFDTPATTNPIDRGRVIGIPHDRIDGAAKVTGTAPYAYERHDAAPNAAYGWIVGSAIAK
GRINAMDLRAAEAAPGVLGIVTHQNAGPLGKGNMNTAHLLGGPQIEHYEQAVALVIADTL
ENARDAARLVRIDYAPDQGRFNLAAERDKGVPPEGGFGGPADTKAGDFEAGFAKAAVKID
QHYTTPDQSHAMMEPHATIAAWNGDKLTLWTSNQMIAWSVGEMAATLKIPKENIRLVSPY
IGGGFGAKLFLRADALLAALGARMVGRPVKVAIARPQIPNNTTHRPATIQRIRIGADRQG
VIDAIAHEVWSGDLPGGGAETAAQQTRLLYRGPNRLTTHRLSTLDLPEGNAMRAPGEAVG
LLALEVAMDELAEACGVDPVELRIRNDVQYDPEAGPQRPFSSRKLVECLREGAERFGWNR
RNPKPGQVRDGRWLVGMGVASAFRNNLVTKSGARIGVDAKGHVTVETDMTDIGTGSYTII
GQTAAEMLGVPLDAVTVRLGDSRFPASSGSGGQWGGNSSTAGVYAAAMALRAKLAEKAGF
PVDKALFEDGLVRLGNQSQPLGTLAGREGLWAEDSMDYGDLTKRYAQATFGAHFCEVGVD
IDTAEVRVRRMGGAFAAGRILNPKSARSQVIGAMTMGVGAALMEELSVDTRFGFFVNHDM
AEYLVPVHADIPHQDVLFIDELDDKSSPMKAKGVGELGICGAGAAVANAIYNATGVRLRD
YPLTIDKILAASTGKRVA
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgaagttcgacacgccagccaccaccaacccgatcgaccggggccgcgtcatcggcatt
ccccatgaccgcatcgacggcgccgcgaaggtcaccggcaccgcgccctatgcctatgaa
cggcacgatgccgcgcccaacgccgcctatggctggatcgtcgggtcggccatcgccaag
ggacggatcaacgccatggacctgcgggccgctgaagccgcgcccggtgtgctgggcatc
gtcacccaccagaatgcggggccgctcggcaaaggcaatatgaacaccgcccatctgctg
ggcggtccgcagatcgaacattatgagcaggcggtggcgctggtcattgccgacacgctg
gaaaatgcgcgcgacgccgcccggctcgtccgcatcgattatgcgccggatcagggccgc
ttcaacttggcggcggagcgcgacaagggcgttccgcccgaaggcggcttcggcggccct
gctgataccaaagcgggcgatttcgaagccggtttcgccaaggcggcggtgaagatcgac
cagcactacaccacgcccgaccagagccatgcgatgatggagccgcacgcgaccatcgcc
gcctggaatggcgacaaactcacgctctggacctctaaccagatgatcgcctggagcgtg
ggcgaaatggcggcgacgctgaagattccgaaggagaatatccgcctcgtctcaccctat
atcggtggcggtttcggcgcgaagctgttcctgcgtgccgatgcgctgctggcggcgctg
ggcgcgcgcatggtcggccgcccggtgaaggtcgcgatcgcccggccgcaaatccccaac
aacaccactcaccgccccgccaccatccagcgcatccgcatcggcgccgacaggcagggc
gtgatcgacgccatcgcgcatgaggtctggtcgggcgacctgcccggcggcggcgcggag
acggcggcgcagcagacgcgcctgctttatcgcggccccaatcggctgacgacgcatcgc
ctgtcgacgctggacctgccggaaggcaacgccatgcgcgccccgggcgaggcggtgggc
ctgctggcgctcgaagtcgcgatggacgagctggccgaggcctgcggcgtcgatccggtc
gaactgcgcatccgcaacgatgtgcaatatgatcccgaagccgggccgcagcgccccttt
tccagccgcaagctggtcgaatgcctgcgcgagggcgcggaacgtttcggctggaaccgc
cgcaatccgaagcctgggcaggtgcgcgatggccgctggctggtcggcatgggcgtcgcc
tccgccttccgcaacaatctggtcacgaagtcgggtgcgcgcatcggcgtcgatgccaag
gggcatgtgacggtcgaaaccgacatgaccgacatcggcaccggcagctacacgatcatc
ggccaaacggcggcggaaatgctgggcgtgccgctggacgccgtgaccgtgcggctgggc
gacagccgctttcccgcgtcgtccggttcgggcggccagtggggcgggaacagctcaacc
gcgggcgtctatgccgccgccatggccctgcgcgccaaattggccgaaaaggcgggcttc
ccggtggacaaggcgctgttcgaggatggtctggtgcgcctgggcaaccagtcccagccg
ctagggacgctggcggggcgcgagggcctttgggcagaggacagcatggactatggcgac
ctcaccaaacgctatgcgcaggccacgttcggcgcgcatttctgcgaggtgggcgtcgac
atcgacaccgccgaagtccgcgtccgccgcatgggcggggcctttgccgccgggcgtatc
ctcaatcccaaatcggcgcgcagccaggtgatcggcgcgatgaccatgggcgtgggcgcg
gcgttgatggaggagctgagcgtcgacacgcggttcggcttcttcgtcaaccacgacatg
gccgaatatctggtgccggtgcatgccgacatcccgcatcaggacgtgctgttcatcgat
gaactggacgacaaaagctcgcccatgaaggccaagggcgtcggtgaactgggcatttgc
ggggctggcgcggcggtcgccaacgcgatctacaacgccacgggcgtgcgcctgcgcgac
tatccgctgacgatcgacaagattctggcggcgtcaaccggaaaaagggtcgcttga
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