Sphingobium sp. YBL2: TZ53_04205
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Entry
TZ53_04205 CDS
T03855
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase
KO
K07516
3-hydroxyacyl-CoA dehydrogenase [EC:
1.1.1.35
]
Organism
syb
Sphingobium sp. YBL2
Pathway
syb00071
Fatty acid degradation
syb00362
Benzoate degradation
syb00650
Butanoate metabolism
syb01100
Metabolic pathways
syb01120
Microbial metabolism in diverse environments
syb01200
Carbon metabolism
syb01212
Fatty acid metabolism
Module
syb_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
syb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
TZ53_04205
09103 Lipid metabolism
00071 Fatty acid degradation
TZ53_04205
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
TZ53_04205
Enzymes [BR:
syb01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
TZ53_04205
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GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
ApbA
Ion_trans
F420_oxidored
NAD_binding_7
Motif
Other DBs
NCBI-ProteinID:
AJR23087
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Position
874802..876871
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AA seq
689 aa
AA seq
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MKQTATSVVTDGVALITLDNPPVNALSASLRQGLQAKLEQAFSDGAVGAILLLCAGRTFI
AGADITEFGQPWQPPSLPDLCAMLDDAPKPVIAAIHGTALGGGFELALSCHYRVAARSAK
VGLPEVHLGLLPGAGGTQRVPRIVGAEAALEIITSGRQIKAAEALSLGLVDAVVDDAALQ
DEALAFARRIVADGGAKPRICDRADALQRDRDRPELFTAFAAANARRFKGFVAPAAIIEA
VEAAVTLPFDEGLAKETALFERLVASPESAAQRHVFFAEREAARVPDIGPDISAIDIRSV
GVIGAGTMGGGITMNFLNAGIPVTLVETSQEALDRGIATIRRNYEATAAKGRMTAAQVEQ
RMGLISPSLDLAALADADLIIEAVYESMDVKTDIFARLDRIARQGVILASNTSFLDLDRI
AAATSRPEWVIGLHFFSPANVMRLLEVVRGAETAKPVVATAMRLAKRIGKVAVLSGVCDG
FIANRLLAPRGAQAEAMMLEGTPIAEIDRVLVDYGFAMGHFQMMDLVGLDVIGRNATERT
VMGDLVAAGRLGQKRGAGYYDYDEKRRSRPSDVTGSLISEVAAARGVAHAPTSGDEALLA
RLLYPVVNEGAKILEEGIALRASDIDIAAVLGYNWPVYRGGPLFWADQVGLDGIVADMRR
LAAVHGETFRPAPLLVRLAETGRRFGDRA
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgaagcagaccgcaaccagcgtcgtcaccgacggcgtcgccctgatcacgctcgacaat
ccgccggttaacgcgctctcggcgtccctccgtcagggattgcaggccaaactggagcag
gcgttcagcgatggggcggttggcgccatcctgttgctctgcgccggacggaccttcatc
gccggcgcggacatcaccgaattcggccagccctggcagccgccgtccttgcccgacctt
tgcgccatgctggacgacgcgcccaagcccgtcatcgccgccattcatggcacggcgctt
gggggcgggttcgaactggcgctctcctgccactatcgggtggcggcgcggagcgcgaag
gtcggcctgccggaggtgcatctgggcctgcttcccggcgcgggcggcacccagcgcgtg
ccccggatcgtcggtgcggaggcggcgctcgaaatcatcacgtccgggcggcagatcaag
gctgccgaagccctttcgctcgggctggtcgacgccgtggtcgatgatgcggccttgcag
gacgaggcgctggccttcgcgcgccgcatcgtggccgatggcggtgcgaagccgcgaata
tgcgatcgggccgacgcgctccagcgcgaccgggatcgcccggagctgttcaccgccttt
gccgccgcaaacgcacgccggttcaaggggttcgtcgcgcccgccgccatcatcgaggct
gtcgaggcagcagtgacccttccattcgatgaggggctggcaaaggaaaccgccctgttc
gagcggctggtcgccagcccggaatccgccgcccagcgccatgtcttcttcgcggagcgg
gaggcggcccgcgttcccgacatcggccccgacatatccgcgatcgacatccgatcggtg
ggcgtcatcggcgcaggcacgatgggcggcggcatcacgatgaacttcctgaatgccggc
atccccgttacgctggtggagacgagccaggaggcgttggatcgcggcatcgccaccatc
cgccgcaactatgaggctacggccgccaagggaaggatgacggcggcgcaggtggagcag
cgcatgggcctgatttcgcccagcctcgacctcgccgcgctcgccgacgccgatctcatc
atcgaagccgtctacgagagcatggacgtcaagacggacattttcgcccggcttgaccgg
atcgccagacagggggtgatcctggcgtccaatacctctttcctcgaccttgatcgcatc
gcggcggcgaccagccggcccgaatgggtcatcggcctccacttcttctcgccggccaat
gtcatgcgcctgctggaggtggtgcgaggggcggagacggcgaagccggtggtcgccacg
gcgatgcggctggccaagcggatcggcaaggtggcggtgctgagcggcgtgtgcgacggc
ttcatcgccaacaggctgctggctccgcgtggcgcgcaggccgaagcgatgatgctggaa
ggcacgccgatcgcggagatcgaccgcgtgcttgtcgactacggctttgccatgggccat
ttccagatgatggatctggtgggcctggacgtcatcggccggaacgcgacggaacgcacc
gtgatgggcgatcttgtcgccgccggacggctgggccagaagcgcggcgcgggttattat
gactatgatgagaagcggcgctcgcgtccgtcggacgtgactggcagcctgataagcgag
gtggccgcggcgcgaggcgtcgcccatgcgcccacatcgggcgacgaggcgctgcttgcg
cggctgctctatccggtcgtcaacgaaggggcgaagatcctggaggaaggcatcgcgctg
cgcgcctccgacatcgatatagccgccgtgctgggctataactggccagtctatcgcggc
ggaccgctattctgggccgatcaggtcgggttggacgggatcgtggcggacatgcgccgg
ctggcggcggtgcatggcgaaaccttccgccccgcgccgctgctcgtgcggctggcagag
acggggcggcggttcggcgacagggcgtga
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