KEGG   Sphingobium sp. YBL2: TZ53_04790
Entry
TZ53_04790        CDS       T03855                                 
Name
(GenBank) helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
syb  Sphingobium sp. YBL2
Brite
KEGG Orthology (KO) [BR:syb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:syb03400]
    TZ53_04790
Enzymes [BR:syb01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     TZ53_04790
    5.6.2.6  RNA 3'-5' helicase
     TZ53_04790
DNA repair and recombination proteins [BR:syb03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    TZ53_04790
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr DEAD Helicase_C ResIII Cas3-like_C_2 T4SS-DNA_transf
Other DBs
NCBI-ProteinID: AJR23185
UniProt: A0A0C5XFR4
LinkDB
Position
999780..1002191
AA seq 803 aa
MNQRLPEPLEQWFTSRGWTPRRHQIDMLSAARSGDHALLVAPTGAGKTLAGFLPTLADLI
ENPGEGLHTLYVSPLKALAVDVRRNLLTPIEEMGLPIRVETRTGDTPSDRKARQRARPPQ
ILLTTPESLSLLLSYPDSFLMFPGLKTVIIDEVHAFATQKRGDILNLSLSRLQSINPGLR
RVALSATVADVDAYRAWLAPDGDIGAVTPVLGEAGADPHVAILIPEGRIPWSGHSGKYAA
RQVMEEIERRATTLVFCNTRGLAELIFQELWSVNEANLPIAIHHGSLSIEARRKVEAAMA
AGRLRALVATASLDLGVDWGNVDCVIQMGAPKGSSRLLQRIGRANHRLDMASEAILIPGN
RFEYLEARAALDAVEAGERDTDDFRPGSLDVLAQHVMGLACAAPFRAEDLLAEVRSATPY
GALTEEAFANVLHFIEGGGYALRAYDRFKRLTLGPDGLWRVSHPRFIQQHRLNAGIIVDQ
PALAVRFANGRKLGTVEEGFAATLSPGDCFFFSGTALEVVRMDSTDLIVRATSRQARIPS
WGGTRMAMSTRLADRVRHFLAEPEQWSRFPDDVREWLEVQKYRSALPEPGQLLIETFPHE
GRHYLVCYSFEGWNAHQSLGMLLTRRMDAQGLMPMGFVSNDYALAVYGLKPITDPQSLFS
ADILDHEFIEWVEQSSLLKRAFRDVAVISGLIERQHPGKRKTGRQVTFSTDLIYDVLRKY
QPDHLLLKAAWADARARMTDVGRLGDLIDRASATMLHVDLDRVSPLAVPVLILIGREQVA
QHEVEDALLIEAEALVAEAMRPD
NT seq 2412 nt   +upstreamnt  +downstreamnt
atgaaccaacgcctacccgaaccgctggagcaatggttcacctcacgcggctggacgccc
cgccgccaccagatcgacatgctgagcgctgcccgatccggcgaccacgcgctgctcgtc
gcgcccaccggcgcgggcaagacgctcgccggcttcctgccgaccctggccgacctcatc
gaaaatcccggtgagggtctccacaccctctatgtctcgcccctcaaggcgctcgccgtc
gacgtgcggcgcaaccttctgacgcccatcgaggaaatgggcctgccgatccgggtggaa
acccgcaccggcgacaccccttccgaccgcaaggcgcgccagcgcgcccgcccgccgcaa
atcctgctcaccacgccggaatcgctgtcgttgctgctgagttatcccgacagcttcctg
atgttcccaggcctgaagacggtcatcatcgatgaggtccacgccttcgccacgcaaaag
cgcggcgacatcctcaacctttccctgtcccgcctccagagcatcaatccgggccttcgc
cgcgtggcgctgtcggcgaccgtcgccgatgtcgatgcctatcgggcctggctggccccg
gacggggacatcggcgccgtcactccggtcttgggagaggcgggcgccgatccccatgtc
gccatcctcatccccgaagggcgcattccctggtccggccactccggcaaatatgccgcc
cggcaggtgatggaggagatcgagcgccgcgccacgacattggtcttctgcaacacgcgc
ggcctggcggaactgatcttccaggaactctggtcggtgaacgaggcgaacctgcccatc
gccatccatcatggcagcctttccatcgaagcccgaaggaaggtggaggcggcgatggcg
gccggcaggttgcgcgcgctggtcgccaccgcctcgctcgatctcggcgtcgactggggc
aatgtggactgcgtgatccagatgggcgcccccaagggcagttcgcgcctgctccagcgc
atcgggcgggccaatcaccgcctcgacatggcgtccgaggcgatcctcatccccggcaac
cgtttcgaatatctcgaagcccgcgcggcgctggacgcggtggaggcgggcgagcgcgac
accgacgatttccgtccgggcagcctggacgtccttgcccagcatgtcatgggcctcgcc
tgcgcagcgccctttcgggcggaagatctgctggcggaagtccggtcggccaccccctat
ggcgcgttgacggaggaagcctttgccaatgtcctccatttcatcgagggcggcggctat
gccctgcgcgcctatgaccgcttcaagcggctgacgcttggacctgacggtctatggcgc
gtctcccatccgcgcttcatccagcagcatcgcctcaacgccggcatcatcgtcgaccag
ccggcgctcgccgtccgcttcgccaatgggcgcaagctcggcacggtggaggagggcttc
gccgccaccttgagccccggcgactgcttcttcttttccggcaccgcattggaagtggtc
cgtatggacagcaccgacctcatcgtccgcgcgacttccagacaggcacgcatccccagc
tggggcggcacgcgcatggccatgtccacgcggctggccgaccgcgtccgccacttcctg
gccgaaccggagcaatggtcccgctttcccgacgatgtgcgcgaatggctggaggtgcag
aaatatcgctcggccctgcccgaaccggggcaattgctgatcgagacattcccgcatgag
ggacggcactatctggtctgctacagtttcgaaggctggaacgcgcatcagtcgctgggc
atgctgctgacccgccgcatggatgcgcaggggctgatgccgatgggcttcgtttccaac
gactatgcgctggccgtttatgggctgaagccgatcaccgacccgcagagcctcttttcg
gccgacatattggatcatgaattcatcgaatgggtcgaacagtcgagcctgctcaagcgc
gcctttcgcgacgtggccgtcatttccggcctgatagagcgccagcatcccggcaagcgc
aagacgggtcggcaggtcactttctcgaccgacctcatctacgacgtgctgcgcaaatat
cagcccgatcatctgctgctgaaggcggcctgggccgacgcccgcgcacggatgaccgac
gtgggacggttgggcgacctgatcgaccgcgcctcggccaccatgctgcatgtcgatctc
gaccgggtgagcccgctcgccgtccccgtgctgatcctcatcggacgcgagcaggtcgcc
cagcatgaggtggaggatgccctgctcatcgaggccgaagccctggttgcggaagccatg
cgcccggattga

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