Sphingobium sp. YBL2: TZ53_04885
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Entry
TZ53_04885 CDS
T03855
Name
(GenBank) histidine kinase
KO
K07646
two-component system, OmpR family, sensor histidine kinase KdpD [EC:
2.7.13.3
]
Organism
syb
Sphingobium sp. YBL2
Pathway
syb02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
syb00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
TZ53_04885
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
syb01001
]
TZ53_04885
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
syb02022
]
TZ53_04885
Enzymes [BR:
syb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
TZ53_04885
Protein kinases [BR:
syb01001
]
Histidine kinases
OmpR family
TZ53_04885
Two-component system [BR:
syb02022
]
OmpR family
KdpD-KdpE (potassium transport)
TZ53_04885
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KdpD
DUF4118
HATPase_c
HisKA
GAF_3
Usp
HATPase_c_2
MASE1
ECF_trnsprt
Motif
Other DBs
NCBI-ProteinID:
AJR23197
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Position
complement(1021344..1024004)
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AA seq
886 aa
AA seq
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MSEPDRRDPEAYLRQAAREGRGRLKIFLGAAPGVGKTYEMLIDGMQRLKAGVDVAVGVVE
THGRRETEALLHGHEVISRRAVDHQGHSLGEMDLDAILVRRPGLVLVDELAHSNAPGSRH
PKRYQDVEELLDAGIDVYSTVNIQHVESLNDVVASFTRVRVRETVPDSILETAEIEVVDI
PPDELIDRLKEGKVYIPAEASRALNHFFSKSNLTALREMALRRAAQAVDAQMLDYVRAHA
LAGSFAAGERVVVAISELPSAQGLVRAAKRLADALKAPWTAVHIETQRSLAFTAEERGHL
ADTMALASRLGGTTATIPAPSVVAGLRQYAADARATQIVIGKASRSWWFELRHGSVVDRL
VRAMEDVAIHVLPGDRFAPPRRTARMGPWGKPADYLWSTAMIALMTAIGRLLVQTIALGN
IALLYLVPVMFAAASFGLRAGLFAGLLSSLAYNFFFLPPTGTLTVSNPENVISILVLLGV
AIVTSQFAARVRAQADLAHGSARQNAALAGFSRQLTAAASQDELMHAICAEVGRMFDVRT
VLLLPSPDGPQLRAAVPPEDRLEQIEKAAAQWAMDNEQPAGRGSSTLTASDWLFHPLRTT
RGVLGVLGLAREDAGEPLRSDQLPLLMSLLDQASIAFDRMALEEEMLDARQIRERDRLRS
ALLSSVGHDLRTPLTTIISAAHELKRQHPCDLADTVEAEALRLTRFVANLLDMARVEAGA
LPLKLEPVDLFDAVAGAVHDTRQSLGRHEVKVDILPDIPLVRVDPTLLHHILINLLDNAG
RYADPDTPVTIQGQRLPDAITLSVIDQGPGIPPGSEARVFDTFTRMEGSDRAKHGTGLGL
AIVKGFAEAMGLGVSAANRADPPGACFTLRFPQASILSPLADEDMP
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaccggaccgccgcgatccagaagcctatctgcgtcaggcggcgcgggaaggc
cgcgggcgtctgaagatattcctcggcgcggcgccgggcgtcggcaagacctatgagatg
ctgatcgacggcatgcagcgcctgaaggccggcgtcgacgtggcggtgggcgtggtcgag
acccatggccggcgggagacggaagcgctgctccacggccatgaggtcatttcccggcgc
gcagtcgatcatcagggccatagcctgggcgagatggatctggacgcgatcctcgtccgc
cgccccgggctggtgctggtggacgaactcgcccacagcaacgcgccgggcagccgccat
ccgaaacgctatcaggatgtggaggagctgctcgacgccgggatcgacgtctattcgacc
gtgaatatccagcatgtcgaaagcctgaacgacgtcgtcgcctccttcacccgcgtccgg
gtgcgcgagacggtgccggattccatcctcgaaacggcggagatcgaggtggtcgacatt
ccgcccgacgagctgatcgatcggttgaaggagggcaaggtctatatcccggcggaggcc
agccgggcgctcaaccatttcttctccaagtccaatctgaccgcgctgcgcgagatggcg
ttgcgccgcgccgcgcaggcggtggacgcgcagatgctggactatgtgcgcgcccatgcg
ctggcaggcagcttcgcggcgggcgagcgggtcgtcgtcgccatcagcgaactgccgagc
gcgcaggggctggtccgcgccgccaagcggctggccgacgcactgaaggcgccctggacc
gccgtgcatatcgaaacgcagcgcagcctggccttcacggcggaggagcgcggccatctg
gccgacaccatggcgctcgcatcgcgcctgggcggaacgaccgcgaccatccccgccccc
agcgtcgtggcggggctgcgccaatatgcggcggacgcccgcgccacccagatcgtgatc
ggcaaggcgagccgaagctggtggttcgaactgcggcacgggtcggtggtcgaccgtctg
gtccgcgccatggaagacgtcgccatccacgtcctgccgggcgaccggttcgcgccgccc
cgccggaccgcccgcatggggccatggggcaagcccgccgactatctctggtccacggcg
atgatcgcgctgatgaccgccatagggcggctgctggtccagaccatcgcgctcggcaat
atcgccctgctctatctggtgccggtgatgttcgccgccgccagcttcggcctgcgcgcc
gggctgttcgcgggtctgctttccagcctcgcctataatttcttcttcctgccgcccacc
ggcacgctgaccgtcagcaatccggaaaatgtcatctccatcctcgtcctgctgggcgtc
gccatcgtcaccagccagttcgccgcccgcgtccgcgcccaggcggacctggcccatggc
agcgcccggcagaatgcggcgctggcgggattttcccggcaactgaccgcggcggccagc
caggacgagctgatgcatgccatctgcgccgaagtggggcgaatgttcgacgtgcgcacc
gtcctcctcctcccatcgcccgacggtccgcaactgcgcgccgccgtgccgccggaggac
cggctggagcagatagagaaggccgccgcccaatgggcgatggacaatgagcagcccgcc
gggcgcggttcctccacattgacggcgtcggactggctgttccacccgctgcgcacgacg
cgcggcgtgctgggcgtgctgggactggcgcgggaggatgcgggggagccgttgcggtcc
gaccagttgccgctgctcatgagcctgctcgaccaggcgtccatcgccttcgaccgcatg
gcgctggaggaggagatgctggacgcccgccagatccgcgagcgcgaccggctgcgttcc
gccctgctctcctcggtcgggcacgacctgcgcacgccgctcaccaccatcatctccgcc
gcgcatgaactgaagcgccagcacccctgcgaccttgccgacacggtggaggcggaggcg
ttgcggctgacccgcttcgtcgccaatctgctggacatggcgcgggtggaggcgggcgcc
ctgccgctgaagctggagcccgtggacctgtttgacgcggtggcgggcgccgtccacgat
acgcgccagtcgcttggccggcatgaggtgaaggtcgacatattgcccgatattccgctg
gtgcgggtcgatccgacgctgctgcaccatatcctcatcaacctgctcgacaatgcgggg
cgctatgccgatccggatacgcccgtgaccatccagggccagcggctgcccgacgcgatc
accctgtcggtgatcgatcagggaccgggcatcccgccggggagcgaggcgcgcgtcttc
gacaccttcacccgcatggaggggtcggaccgggcgaagcatggcaccggccttggcctt
gccatcgtaaagggctttgccgaggcgatggggctgggcgtatcggccgccaaccgggcc
gatccgcccggcgcctgcttcaccctgcgctttccgcaggcctcgatcctgtctccgctt
gctgacgaggacatgccatga
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