Sphingobium sp. YBL2: TZ53_05110
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Entry
TZ53_05110 CDS
T03855
Symbol
gabD
Name
(GenBank) succinate-semialdehyde dehydrogenase
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
syb
Sphingobium sp. YBL2
Pathway
syb00250
Alanine, aspartate and glutamate metabolism
syb00310
Lysine degradation
syb00350
Tyrosine metabolism
syb00650
Butanoate metabolism
syb00760
Nicotinate and nicotinamide metabolism
syb01100
Metabolic pathways
syb01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
syb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
TZ53_05110 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
TZ53_05110 (gabD)
00310 Lysine degradation
TZ53_05110 (gabD)
00350 Tyrosine metabolism
TZ53_05110 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
TZ53_05110 (gabD)
Enzymes [BR:
syb01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
TZ53_05110 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
TZ53_05110 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
TZ53_05110 (gabD)
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Motif
Pfam:
Aldedh
Amidohydro_2
Motif
Other DBs
NCBI-ProteinID:
AJR23235
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Position
complement(1073382..1074806)
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AA seq
474 aa
AA seq
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MKREQCFIAGEWVGNGEWIAVDNPATGGIIGRVPALGREESRRAIEAAAMAMPAWAARPA
GERAAILQRIAALMLERADDLAALLTEEQGKPLAEAKGEIAYAASFFQWFGEEAKRAYGD
IIPGPMPDRRIMVLKHPVGVVAAITPWNFPAAMVARKLAPALAAGCGVVLKPSELTPFTA
LAIAQIADEAGVPRGLLNVVTGDAREIGAEMTGNPVVRKISFTGSTAVGRLLMEQASRSI
KKLSLELGGNAPFIVFDDADLDAAVTGAIQSKYRNAGQTCVCANRFYVQAGVYDAFAGKL
ATATAKLRVGEGTRTGVDIGPLIDERAVAKVQRHVDDAVAKGARIVLGGGPAPDGPRFFT
PTILRDVKPGMQVLEEETFGPLAPLVKFDDDAEAIALANDSEFGLAAYFYARDVNRIWRA
AEGIESGIVGINTGLISTEVAPFGGVKQSGIGREGSRYGLDDYLELKYLCLSLA
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
gtgaagcgcgaacaatgtttcatcgcgggtgaatgggtcggcaatggggagtggatcgcg
gtcgacaatccggcgacgggcgggatcatcggccgcgttccggcgctggggcgggaggag
agccggcgggcgatagaagcggcggccatggccatgcccgcctgggcggcgcgcccggcc
ggcgaaagggccgcgatcctgcaacgcatcgccgccctgatgctggagcgcgccgacgat
cttgccgccctgctgaccgaggaacagggcaagccgctggcggaggcgaagggcgagatc
gcctatgccgcgtccttcttccaatggttcggggaggaagcgaagcgcgcctatggcgac
atcattcccggtcccatgccggacaggcgcatcatggtgctgaagcacccggtgggcgtc
gtggccgcgatcaccccctggaacttccccgccgccatggtcgcgcgcaaactggccccg
gcgcttgcggctgggtgcggggtggtgctcaagccttcggaactcacgcccttcaccgca
ttggcgatagcgcagatcgctgacgaggcgggcgtgccccgggggcttctcaacgtcgtg
accggcgacgcgcgggagatcggggccgaaatgacgggcaatcccgtggtccgcaagatc
agcttcaccggatcgacggcggtcgggcggctgctgatggagcaggcgtcccgcagcatc
aagaaactcagcctggaactgggcggcaacgcgcccttcatcgtcttcgacgacgccgat
ctggatgcggccgtcacgggcgcgatccagtccaaatatcgcaatgcaggccagacctgc
gtctgcgccaaccgcttctatgtccaggcgggcgtctatgacgcctttgccgggaagctg
gccaccgccaccgcgaaactgcgggtcggcgaagggacccgcaccggcgtggacatcggt
cccctgatcgacgaacgggccgtcgcgaaggtccagcggcacgttgacgatgccgtggcg
aagggcgcgcggatcgtgctgggcggcggtcccgcccccgacggcccgcgcttcttcacc
ccgacgatcctgcgcgacgtgaagccgggcatgcaggtgctggaggaggagaccttcggc
cccctggcgccactggtgaagttcgatgacgacgccgaagccatcgcccttgccaatgac
agcgaattcggactggccgcctatttctacgcgcgcgacgtcaaccgcatctggcgcgcg
gcggaaggcatcgaatccggcattgtcggcatcaacaccggcctcatttcgaccgaagtg
gcgccctttggcggcgtcaagcaatcgggcatcggccgggaggggtcgcgttacgggctg
gatgattatctggagctgaaatatctctgcctgtctcttgcttga
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