Sphingobium sp. YBL2: TZ53_07340
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Entry
TZ53_07340 CDS
T03855
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
syb
Sphingobium sp. YBL2
Brite
KEGG Orthology (KO) [BR:
syb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
syb02000
]
TZ53_07340
Transporters [BR:
syb02000
]
Other transporters
Pores ion channels [TC:
1
]
TZ53_07340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
AJR23559
LinkDB
All DBs
Position
1578223..1581042
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AA seq
939 aa
AA seq
DB search
MRLKNTLYCGVMLSVLGATAPALAQSAVPQADDGNAIIVTGSRIRRDPTEQDKPIVTVDQ
ESIARTGLTSIADVLQRIPSAAGGLNTKTNNAGNIGGPPDGTGVSSGSAEIDLRYLGAKR
TLVLVDGMRYVNGSAAGGIPASVDLNTIPQSMIERVEVLQSGASPLYGSDAVAGVVNIIT
RQSQKGLDMSAQFGTYRQGDGHTYDINASYGIQSDRVSIVFGGNYVKQEGVSTADRSISQ
WPAAGGSSCADGGCSSATPNGRYDVLGQSLTLSNPIIGRAPALSDYRTYVSATDSFNFAP
YNYLLTPSKRYGAFLNGKFEFSDAVSLRTRLVYQHRESTTQAAFLPLFIGPDAGNGNLLD
TISVDASNPYNPFGVTLSADPGSANYSTIRRRFVEGGPRIFSQEVDTLTMAATLEGTFDV
GDHKWYWDVNGSYGTNNAHQVFTGNLNAARLAQALGPVGACTGACVPFNIFGGAGSITQA
MLDYVTFDERDRSEQELWDVTANLSGDLFDLPGGAVGFAVGYEHRDQQASYTPDPIITAG
LGADVPTSPARGGFNVDEFYGELRIPILSDTPFFQKLELDGAVRHSNYSSFGSNTTYTVS
GLWKPTRDLLLRGGYAESLRAPSIGELYAGRSRTDATINDPCTNVPGSPWQTNATVRANC
IANGVPASGSYAEPQGGQLGVFSQGFTGLKPETSKTWTAGGVYSPAWARDSFASAFSIEV
NYYTIKLKNAIDSVPATLTLQRCAFEADPISCAAITRTGSGAVAGIDGVLQNLNAIETDG
IDGTLNYRSKMIGNGSIGLNINAAYLLKYNIKPPADLGAPTIKCAGTERCGASDQAYPHF
KANATLDYSTESYGLSFTGRYLSKVTESDGHVMKATFYGDIQAYFSPDWLDHRTRLTIGV
NNVFDKDPPLCGTCDGANFDTTSYDVPGQFGYLRLSYKM
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
atgcgattgaaaaataccttgtattgcggcgtcatgctttcggttcttggagcgactgcg
ccggcattagcgcagtccgctgttccgcaggccgatgacggcaacgccatcatcgtcacc
ggatcgcgcattcgccgggatcccaccgaacaagacaaacccatcgtcacggtggatcag
gaatccatcgcgcggaccggcctgacctcgatcgccgacgtgctgcaacgtatcccaagc
gccgcaggcggcctcaacaccaagaccaacaatgcggggaatatcggtgggccgcccgac
ggcaccggcgtgagttcgggttcagccgaaattgacctgcgctatctgggtgccaagcgg
acactcgtgctggtcgacggtatgcgctacgtcaacggatcggcggctggcggcattccg
gcctcggttgatctcaacaccattccgcagagcatgattgagcgggtggaagtgctgcag
tcaggtgcttccccgctctatggctcggacgcggttgcgggcgtggtgaacatcatcacc
cgccagtcgcaaaagggcctcgacatgtcggcccagttcggcacctatcgtcagggcgac
ggacacacctacgacatcaacgccagttacgggatccagtccgatcgcgtgtcgatcgtc
tttggcggcaattatgtgaagcaggaaggcgtcagcaccgccgaccgctcgatctcgcaa
tggcccgccgccggcggtagcagttgcgcggatggcggttgttccagcgccacgcccaac
ggccgctacgacgtgctgggacaaagcctgacgttgagcaatccgatcataggccgtgcg
ccggcgctgagcgactatcgcacctatgtgtccgcaacggactctttcaacttcgcgcct
tataattatctgctgacgccctcgaagcgttatggcgcctttctgaacggcaagtttgaa
ttttccgacgctgtcagcctgcggacaaggctggtctatcagcaccgcgagtcgaccacg
caagcagcgttcctaccgctgttcatcgggcccgatgcgggtaacggcaacctgctggac
acgatctcggtcgatgccagcaacccctataatccatttggtgtcacgctctcggccgat
ccgggatcggctaactattcgacgatccgccgccgcttcgtagagggcggaccgcgcatc
ttcagccaggaagtcgatacgctcacaatggcggccacgctggaaggcacgttcgatgtc
ggcgatcataaatggtattgggacgtcaatggcagctatggcaccaataatgcgcaccaa
gtcttcacgggtaacctcaacgctgccaggctcgcccaggcgctggggccagtcggcgcc
tgtaccggcgcttgcgtaccgttcaatatcttcggcggtgccgggtcgataactcaggca
atgctcgattatgtgaccttcgacgagcgcgaccgcagcgaacaggaattgtgggacgtc
accgccaacctgtcgggcgacctgttcgacctgcctggcggcgcggtgggcttcgctgtc
ggctatgagcatcgcgatcagcaggcatcctatactcccgacccgatcatcacagcgggc
ctgggggcggacgtgccgaccagccctgcacgcggcggcttcaatgtcgatgaattctat
ggcgaactgcgcatccccatcctgtccgacacgccctttttccagaagttggaactggac
ggcgcggtgcgccattccaactattccagcttcggcagcaacaccacctacacggtttcg
ggcctgtggaagccgacccgcgatctgctcctgcgcggcggttatgccgaaagccttcgc
gcgcccagcattggtgaactctatgccggccgttcgcgcactgacgcgacgatcaacgat
ccctgcacgaatgtgccgggcagcccatggcagaccaacgcgaccgtccgggcgaattgc
attgccaatggcgtccctgccagcggcagctatgccgaaccgcagggcggtcagttgggc
gttttctcgcagggctttacgggtctgaagccggaaacatccaagacttggaccgcaggc
ggcgtctatagcccggcctgggcacgcgacagcttcgccagcgcgttcagcatcgaggtc
aattactacacgatcaagctgaagaatgcgatcgactcggtgcccgccacgctcacgctc
cagcgttgcgcgttcgaggccgatccgatcagctgtgccgcgatcacccgtaccggcagc
ggtgcggtcgcgggcatcgacggcgtgctccagaacctcaacgcgattgaaaccgacggg
attgacggcactctgaactaccgctcgaagatgatcggcaacggctccatcggtctcaac
atcaacgccgcttatttgctgaagtacaacatcaagcccccagcggatctgggcgcgccg
acgatcaagtgcgccggtacggagcggtgcggggcgagcgatcaggcctatccgcatttc
aaggcgaacgccacgctggactactcgaccgaaagctatggattgtccttcaccggccgc
tatctcagcaaggtcactgaaagcgacggccatgtcatgaaggcgaccttctacggggac
atccaggcctatttctcgcctgactggctggatcatcgcacccgcctgacaatcggcgtc
aacaatgtgttcgataaggatccgccgctttgcggaacatgcgacggcgcgaatttcgac
acgaccagctacgacgtgccggggcagttcggctatctgcgcttgtcctacaagatgtaa
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