Sphingobium sp. YBL2: TZ53_08445
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Entry
TZ53_08445 CDS
T03855
Name
(GenBank) DNA-directed RNA polymerase subunit omega
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
syb
Sphingobium sp. YBL2
Pathway
syb03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
syb00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
TZ53_08445
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
syb03021
]
TZ53_08445
03400 DNA repair and recombination proteins [BR:
syb03400
]
TZ53_08445
Enzymes [BR:
syb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
TZ53_08445
Transcription machinery [BR:
syb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
TZ53_08445
DNA repair and recombination proteins [BR:
syb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
TZ53_08445
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb6
DUF8013
Motif
Other DBs
NCBI-ProteinID:
AJR23744
LinkDB
All DBs
Position
complement(1830282..1830626)
Genome browser
AA seq
114 aa
AA seq
DB search
MARVTVEDCVDKVTNRFDLVLLAAQRAREISGGAELTLDRDRDKNPVVALREIAEETVLP
VDLHDSLVASLQKVQIDDDDTPDEIGSIAQSAEALRLTAAAPPRNQNIGGDYDG
NT seq
345 nt
NT seq
+upstream
nt +downstream
nt
ttggcccgcgttaccgtcgaagattgcgtcgacaaggttaccaaccgttttgacctcgtc
ctgcttgccgcgcagcgcgcccgtgagatttcgggcggcgccgagctgactctggaccgt
gatcgcgataaaaatcccgtcgtcgccctgcgcgagatcgcggaagagaccgtcctgccg
gtggatctgcatgattcgctcgtcgcctcgctgcagaaggtgcagatcgatgacgacgac
acgccggacgaaatcggctcgatcgcccagtcggcggaggccctgcgcctgaccgccgcc
gccccgccgcgcaaccagaatatcggcggcgactacgacggctga
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