Sphingobium sp. YBL2: TZ53_08640
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Entry
TZ53_08640 CDS
T03855
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
syb
Sphingobium sp. YBL2
Brite
KEGG Orthology (KO) [BR:
syb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
syb02000
]
TZ53_08640
Transporters [BR:
syb02000
]
Other transporters
Pores ion channels [TC:
1
]
TZ53_08640
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
DUF6661
Motif
Other DBs
NCBI-ProteinID:
AJR23778
LinkDB
All DBs
Position
1873746..1875938
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AA seq
730 aa
AA seq
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MTNFGYRRRWKWALLVSATIELAASGTARAQAPADADMRADITVTARKVPEPLLKAPLAV
TSISGDSIVAAGLQTITDLTRMAPNVDIGGGIAGQLQGQISIRGISTLVRNIGLETGVGI
YVDDVYVGRPENFVQHLLDVDRVEIVRGPQGTEYGKNTIAGVVNVQTKQPDADPGASIRL
DAGNYDYRRGEAVLGTRLNERLSVRGAVAYARQDGFYKHLSGGRDAGSTDLLTWRLSAKY
APTDQLSFIARWEGLRDRGTPAFFQADALAGYPADFPSREPLHINNNRPNRLHRDSQGIS
LRTEWASDAITLTAITAYRDSSYHASLDDDQEQVDFVSADNFSDDSHFFSQELRLAGGTG
KLRYLLGAYYFDQMVRTDRGLGLGADTGVPGEPMLTTKGSVKTESGALFGRLDYELTDRL
SLSAGLRYTREKKRAHFVQDDASGTGIFTYLGFPNLTFDGRSTDDDLSPSATISYEVVPD
ANVYARFSRGFKSAAYNVDLASSLGGLTASPEKATSYEVGFKMLTLDRRMRLNLAAFHTD
YDRLQVSQVLGSGLALTNAGRAQVEGVEGELSLQLTSRLRLEGNAAILDAHYKRFDNCGV
PASVIPSVGSPSTDCTGNDLVLAPHFTGYSAVSYEVPVRIGTIFARADVDHRSTVYFEPT
NSDAFKAGPRTLVNLRFGLRRGQWDIAAWVQNLTDRIYKTYADDRSGLGVYRTAAYGPPR
TYGVSLLAAF
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgacgaattttggatacaggcggcgatggaagtgggcacttctggtttccgcgacgatc
gaactggcagcttccggcacggcccgggcgcaggccccggccgatgcggacatgcgcgcc
gacatcacggtgacggcgcgcaaggtgccggaaccgctgctgaaggcgccgctggcggtc
accagcatttcaggcgattcaatcgtggcggcggggttgcagaccatcaccgacctgacc
cgcatggcccccaatgtcgacatcggcgggggcattgcaggccagttgcaggggcagatc
tcgatccgcggcatctccaccctggtccgcaatatcgggctggaaaccggcgtcggcatc
tatgtggacgatgtctatgtcggccggccggaaaatttcgtccagcatcttctggatgtc
gaccgggtggaaatcgtgcgcggcccgcaagggacggaatatggcaagaacaccatcgcc
ggcgtcgtcaacgtccagacgaagcagcccgacgccgatcccggcgcctccatccggctg
gacgcgggcaattacgattacaggcggggcgaggcagtgctgggcacgcgcctcaacgaa
cggctttcggtgcgcggcgcggtcgcctatgcccggcaggacggcttctacaagcatctg
tccggcggcagggatgcgggatcgaccgacctgctgacctggcggctgtcggccaaatat
gcgccgaccgaccaactgtccttcatcgcccggtgggaggggctgcgcgaccgcggcacg
cccgccttcttccaggcggacgcgctggccggctatccggcggatttcccttcgcgggag
ccgctgcacatcaacaacaaccggcccaaccggctgcaccgcgacagccagggcatttcg
ctgaggacggaatgggcatcggacgcgatcacgctgacggccatcaccgcctatcgcgat
tcctcctatcatgcctcgctggacgacgatcaggagcaggtcgacttcgtctccgcggac
aatttcagcgacgattcccatttcttcagccaagaactgcggctggcgggcggcaccggc
aagctgcgctatctgctgggcgcctattatttcgaccagatggtgcgcaccgaccggggc
ctgggtctgggcgccgataccggcgtgccgggcgaaccgatgctgaccaccaagggcagc
gtcaagacggagagcggggcgctgttcgggcggctcgactatgaactgaccgatcgcctg
tcgctttccgccggcctgcgctacaccagggagaagaagcgcgcccatttcgtccaggat
gacgccagcgggacgggtatcttcacctatctgggcttcccgaacctcaccttcgacggc
cggtcgaccgatgacgacctgtcgcccagcgcgaccatttcctatgaggtcgtgccggac
gccaatgtctatgcgcgcttctcccgcggcttcaagagcgcggcttacaatgtcgacctc
gcctcttcgctgggcgggctgaccgccagcccggaaaaggcgaccagctatgaggtcggc
ttcaagatgctgacgctggaccggcggatgcggctgaaccttgccgcgttccacaccgat
tacgaccggttgcaggtgtcgcaggtgctgggcagcgggctggcgctcaccaatgccggc
cgcgcgcaggtggagggcgtggaaggcgagctgtcgctgcagctgacgtcccggctgcgg
ctggaggggaatgccgccattctggacgcacattataagaggttcgacaattgcggcgtt
cccgcatcggtcattccctctgtcggcagccccagcaccgactgcaccggcaacgacctg
gtcctggcgccccatttcaccggctatagcgccgtcagctatgaggttccggtgcggatc
ggcacgatcttcgcccgcgcggacgtggatcaccggtcgaccgtctatttcgagccgacc
aattcggacgccttcaaggccgggccgcgcacgctggtcaacctgcgtttcggcctgcgt
cgcgggcagtgggacatcgccgcctgggtccagaacctgaccgacaggatctacaagacc
tatgccgacgaccggtccggtctgggcgtgtaccgaacggcggcatacgggccgccgcgc
acctatggcgtcagccttttggcggcattttag
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