Sphingobium sp. YBL2: TZ53_09170
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Entry
TZ53_09170 CDS
T03855
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
syb
Sphingobium sp. YBL2
Brite
KEGG Orthology (KO) [BR:
syb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
syb02000
]
TZ53_09170
Transporters [BR:
syb02000
]
Other transporters
Pores ion channels [TC:
1
]
TZ53_09170
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
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Motif
Other DBs
NCBI-ProteinID:
AJR23869
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Position
complement(1998986..2001559)
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AA seq
857 aa
AA seq
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MHSVKIWAGAGVALAAVALAQGAQAQPADNAAAAAASERDAIIVTGTRRTDRTVSESAVP
VDVFSAGDLASQATSDIKAAIKNLVPSFNLQRNALFDGSAFVRPPTLRGLPPDETLVLIN
GKRVHRSALVQVSGGSLAAGSQSADLSQIPGAAVQRVEVLRDGAAAQYGSDAIAGVINFA
LKSNAEGLSLNARYGEYYEGDGRDIQLSGNWGLKLGNEGGFINLTGEYINAHDTNRAVQR
PDAVVLETLGYDVKQPVTRFGSPDTEAYRFFVNAELPLGDDALYFFGNYGYSDQVIDFNY
RRPIAVTTTGPAGSPFTFGKSISLYYLDRNADGTWNADGRTWNDANIFPNGFTPRFRSTN
TDISAVGGYKGEIGGLHYDASIGYGQNRIKYYISDTFNPSLGPDSPTDFYDGSLEQRELN
ANLDLSYPLEIGLASPLNIAGGFEYRRESFLIGAGDAASYTQGIYASQTVRRADGSTFLV
THPVGSNGFPGYGPTSIVDRSRASQAAYLDLEVDVTPRFTLGGAVRYEHYDDFGGTTNVK
ATARYAFSDAIALRGAASTGFRAPTPGQLYLRNLQTSFIGTNPVPVQIATLSPEDAAARY
YGATALKPEESVNFSGGLVLTPTPSFTITADYYNIKVTNRIGLTSRVSVTDADRVQLAAL
GVVDPNSLGAVQYFTNGFGTRTQGVDFVANYRANTGWGKLGSSLAVNYNRTKLSYRRTIT
LPGGRSLQLIDDERKRDIETLLPRWRGVFTQTAEAGPVDVVARANYFGKFTNNQLASNGG
NKTFGAEVSFDLEVGVKVADKFRIAVGGENIFDNYPDRETRLLYPSTGAPASGFVYPDAS
PLGVLGGFWYLRVSAEL
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atgcattcggtgaaaatctgggccggggccggcgtggccctggcggcggtggcgcttgcc
caaggcgcgcaggcgcagcccgccgacaatgcggcggcggcggccgcgagtgaacgcgac
gcgatcatcgtcacgggtacgcgccggacggatcgcacggtcagcgaatccgccgtgccg
gtggacgtcttcagcgccggcgacctggcatcgcaggcgaccagcgacatcaaggccgcg
atcaagaatctggttccctccttcaaccttcagcgcaatgcgctgttcgacggatcggcc
ttcgtccggccgccgacgttgcgcggcctgccgccggacgagacgctggtgctgatcaac
ggcaagcgcgtccaccgttccgcgctggtgcaggtgagcggcgggtcgctcgccgccggg
tcgcagagcgccgacctgtcgcagattcccggcgcggcggtccagagggtcgaggtgttg
cgcgacggcgccgccgcccaatatggatcggacgcgattgccggcgtcatcaacttcgcg
ctcaagagcaatgcggaagggctgagcctcaacgcacgctatggcgaatattatgagggc
gacgggcgcgacatccagttgtcgggcaattggggattgaagctgggcaatgaaggcggc
ttcatcaacctgaccggcgaatatatcaacgcccatgacaccaatcgcgccgtacagcgt
ccggacgcggtggttctggaaacgctgggctatgacgtcaagcagccggtgacgaggttc
ggcagtcccgacaccgaagcctatcgcttcttcgtcaacgcagaactgccgctgggcgac
gacgcgctctatttcttcggcaattacggctattcggatcaggtcatcgacttcaactat
cggcgtccgatcgccgtgacgacgacagggccggccggcagccccttcaccttcggcaag
tcgatttcgctctattatctcgaccgcaatgcggatgggacatggaatgccgatgggcgg
acctggaatgacgccaatatctttcccaatggcttcacgccgcggttccgcagcaccaat
acggacatttccgctgtcggcggctataagggcgaaatcggcggactgcattatgacgcc
agcatcggttacggccagaaccggatcaaatattatatcagcgacacgttcaacccgtcg
ctggggccggattcaccgaccgacttctatgacgggtcgctggagcagcgcgagctgaac
gccaatctggaccttagctatccgctggagatcggccttgccagcccactcaacattgcg
ggcggcttcgaatatcggcgcgagagcttcctgatcggcgcgggcgacgcggcgtcctat
acgcagggcatctatgcgtcccagacggtgcggcgcgccgacggttcgaccttcctcgtc
acgcatccggtcggctccaacggctttcccggctatggcccgacatcgatcgtcgaccgg
tcgcgcgccagccaggcggcctatctggacctggaggtggacgtgacgccgcgcttcacc
ctgggcggggcggtgcgttacgaacattatgacgactttggcggcaccaccaatgtgaag
gcgacggcgcgttatgcgttcagcgacgccatcgcgttgcgcggggcggccagcaccggc
ttccgcgcgcccacgccggggcagctttacctgcgcaaccttcagacctccttcatcggt
accaatccggtgccggtgcagatcgccacattgtcgcccgaagacgccgccgccagatat
tatggcgcgaccgcattgaagcccgaggagtcggtcaatttcagcggcggtcttgtcctg
acgcccacaccgtccttcaccatcacggcggactattataatatcaaggtgacgaaccgc
atcggactgaccagtcgggtttcggtgacggatgcggatcgggtgcaactggccgcgctg
ggcgtggtcgatcccaattcgctgggcgcggtccaatatttcaccaatggtttcggcacc
cggacccagggcgtggactttgtagcgaattatcgggcgaatacgggctggggcaagttg
ggatcgtcgctggcggtcaattacaaccgtacgaagctcagctatcgccggaccatcacc
ttgccgggcggacggtccctgcaactgatcgacgacgagcgcaagcgcgacatcgagacg
ctgctgccccgctggcgcggcgtgttcacccagacggcggaggcaggaccggtcgatgtc
gtcgcccgcgccaattatttcggcaagttcaccaataaccagcttgcctccaatggcggg
aacaagactttcggcgcggaagtctccttcgatctggaggtcggcgtgaaagtcgcggac
aagttccggatcgccgtgggcggggagaatatcttcgacaattatcccgaccgcgagacc
cggctgctctatccttccaccggcgctccggcgagcgggttcgtctatcccgacgcctcg
ccgctcggcgtgctgggcggcttctggtatctccgtgtctcggcggagctttaa
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