Sphingobium sp. YBL2: TZ53_09855
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Entry
TZ53_09855 CDS
T03855
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
syb
Sphingobium sp. YBL2
Brite
KEGG Orthology (KO) [BR:
syb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
syb02000
]
TZ53_09855
Transporters [BR:
syb02000
]
Other transporters
Pores ion channels [TC:
1
]
TZ53_09855
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Omp_AT
CCB2_CCB4
Motif
Other DBs
NCBI-ProteinID:
AJR26306
LinkDB
All DBs
Position
2177608..2180688
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AA seq
1026 aa
AA seq
DB search
MIHRALCNSSALTACLASLSLIAPAAAQSSTAQQSDTQTAPGQAPAPTTNSAEPSEGDTI
VVTGSILRTTTAATPSPITVVNAETLEQRGINTTQEAVQRLASNNGPALTNSFSANGAFA
AGASAVSLRGLSTNSTLVLFDGLRAAYYPLADDATRNFVDLNTIPDDIVDRIEVLRDGAS
STYGADAIAGVVNVITKKQITGISGRAEAGISQRGDGANHRLSLTAGWGDLDDQGFNVYI
SGFYFDQAALYNRDRRYPYNSQNQSGICRDGVCGPSIGPNGGSINPSTGGYSGFSTTTDA
SLFATTFFVAPAGPDNAAETGRYQFLNPAAGCIAGETPYTLTPQEFAADARAPGTVCQGD
LVNQYGVISPNIERWGGSFRATGRITDDIEAYFQANFLQSNVSFTGLPASIRRNGPAGIN
FPRFSTAAAAGGANSVGSLVLALPVYVCPLINNLPDPNCTAANPAARLNPNNPFAAQGQV
ARILGRIPNIQEYNETRSRTYRAALGVTGKLWDDWDFAVNGVAMRTDLRRTQNGYIYIQN
LLNVIADGSYDFVNPYANSQATLDYLSPDNVTDANSQLYAVEATLSGNLFDLPGGPMQIG
GGLSLRYESIDAPSANSDVNGPTQRYFVLNAFGTKGHRTVRSAFVELNAPVLESLEINAS
GRYDDYSSGQHAFSPKVGAKFTPIRQVALRGTWSRGFRIPSFAEANAIPTTGFVTAAQSL
YNDAFLSQYGCSLATFNSCPAYISSASYGQTTLASPDLKPERSTSFTAGIVVEPIRNISL
SIDYFNIKKTGAITTPSNRPALLAYYAGQVVPSGYNIIADAPAPDFPGATPRVAFVQSQL
INANTIRSEGLDFAARAQIDLGPDIRFTSALEASYIINLSTTFPDGTTESYEGTAGNFNL
TAGSGTPEWHGNWQNTLEWGKWTVSATAEYFGGYNLSAADQGTEPGDCGLLSAPFVKCDV
PAYITVDLTTSFKASDRFTFYINILNLFDDLPPIDPVTYGANNYNPVQGGLGIFGRSFRA
GARFTF
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atcatccaccgcgccctctgcaatagctctgcactgacggcctgtctggcgagcctcagc
ctgatcgccccggcggcggcgcaaagcagcactgcgcagcagtccgacacgcagaccgcg
cccggacaggccccggcccccacgaccaactccgccgaaccgagcgagggcgacacgatc
gtcgtgaccgggtccatcctgcgcacgacgacggcagcgacgccatcgcccatcaccgtc
gtcaatgccgagacgctggaacagcgcggcatcaacaccacgcaggaggcggtgcagcgg
ctggcgtcgaacaacggccccgcgctcaccaactccttttccgccaatggggcctttgcc
gccggcgcatcggcggtgtcgctccgtggcctcagcaccaactcgacgctggtcctgttc
gacggcctgcgcgcggcctattatccgctggcggacgatgcgacgcgcaatttcgtcgac
ctcaacaccattcccgacgacatcgtcgaccggatcgaagtgctgcgcgacggcgcgtcc
tccacctatggcgcggacgcgatcgcgggtgtcgtgaacgtcatcacgaagaagcagatc
acgggcatatccggccgggcggaagcgggcatcagccagcggggcgacggcgccaatcac
cggctcagcctgacggcgggctggggcgatctcgatgatcagggattcaacgtctatatc
agcggtttctacttcgatcaggcggcgctctataaccgcgaccggcgctatccctataat
tcgcagaaccagtcgggcatctgccgcgacggcgtgtgcggaccgtccatcgggccgaat
ggaggatcgatcaatccttcgacaggcggctattccggtttttcgaccaccaccgacgcc
agcctgttcgccaccaccttcttcgtggcgccggccggtccggacaatgccgccgaaacc
ggccgctaccagttcctcaaccccgccgccggctgcatcgccggggagacgccttatacg
ctgaccccacaggaattcgcggcggacgcgcgtgcgcccggaaccgtatgccagggcgat
ctcgtcaatcaatatggcgtcatctctcccaatatcgaaagatggggcggttcctttcgg
gcgacgggacggatcaccgacgacatagaggcctatttccaggcgaatttccttcagagc
aatgtgagcttcaccggcctgcccgccagcatccgccgcaacggcccggccggcatcaac
tttccccgcttcagcacggcggccgccgctggcggcgccaattccgtcggttcgcttgtc
cttgccctgccggtctatgtctgcccgctgatcaataacttgcccgatcccaattgcacc
gccgccaatccggctgcccggctcaatccgaacaatcctttcgcggcgcaggggcaggtg
gcgcgcatattggggcgcatacccaatatccaggaatataatgagacccgcagccgcacc
tatcgcgccgctctgggcgttacgggcaagttgtgggacgactgggacttcgcggtgaat
ggcgtcgcaatgcgcaccgacctgcggcggacgcagaacggttatatctatatccagaat
cttctgaacgtgattgccgacggcagctatgatttcgtcaacccttatgccaatagtcag
gcgacgctcgattatctgtcgccagacaatgtgacggatgccaattcccagctttatgcc
gtggaggcgacgctcagcggcaatctgttcgacctgccagggggaccgatgcagatcggc
ggcgggctttcgctgcgctatgaatccatcgatgcgccaagcgccaattcggacgtcaac
gggccgacgcagcgttatttcgtcctcaacgccttcggcaccaagggccaccggacggtc
cgttcggcctttgtcgagctgaatgcgccggtgctggagtcgctcgagatcaacgcttcg
ggccgctatgacgattattcgagcggacagcacgccttctctccgaaggtcggggcgaag
ttcacgccgatccgccaggtcgcgcttcgcggcacctggtcacgcggcttccgcatcccc
agcttcgcggaggccaacgccattccgacgaccggcttcgtcacggccgctcaatcgctg
tacaacgacgccttcctgtcgcaatatggctgttccctggcgaccttcaacagctgtccg
gcctatatcagcagcgccagctatggccagaccacgctggccagccccgacctgaaaccg
gaacggtcgaccagcttcaccgccggcatcgtcgtggagccgatccggaacatttccctc
agcatcgactatttcaacatcaagaagaccggcgcgatcaccacgcccagcaaccgcccg
gcgctactcgcttattatgcgggccaggtggtgccatccggctataatatcatcgcggat
gcgcccgcgcccgactttcccggcgcgacgccgcgcgtggccttcgtgcagtcgcagctt
atcaacgccaacaccatccgttcggaaggactggacttcgccgcgagggcgcagatcgac
ctcggcccggacattcgcttcacctcggcgctggaggcgagctatatcatcaatctcagc
acgacatttccggacggcacgacggaatcctatgaaggaacggccggcaacttcaacctg
accgccggatcgggcacgccggaatggcacggcaactggcagaatacgctggaatggggg
aaatggacggtcagcgcgacagccgaatattttggcggctataatctttccgccgccgac
caggggacggagccgggcgattgcggcctgctttccgcgcctttcgtgaagtgcgacgtg
cctgcctatatcacggtcgacctgacgaccagcttcaaggcgtcggatcgcttcaccttc
tacatcaatatactcaacctgttcgacgatctgccgccgatcgaccccgtcacctacggc
gcgaacaactataatccggtccagggtggactgggaatattcgggcgctccttccgggcc
ggcgcgcggttcaccttctga
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