Sphingobium sp. YBL2: TZ53_09880
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Entry
TZ53_09880 CDS
T03855
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
syb
Sphingobium sp. YBL2
Brite
KEGG Orthology (KO) [BR:
syb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
syb02000
]
TZ53_09880
Transporters [BR:
syb02000
]
Other transporters
Pores ion channels [TC:
1
]
TZ53_09880
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GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
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Motif
Other DBs
NCBI-ProteinID:
AJR23982
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Position
2184329..2186773
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AA seq
814 aa
AA seq
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MMKSFALAASTALASATLWMTPAFAQDAAPQTAQPDYGSDIIVTATRRETTLQSTPIAVS
AFGQAQLDRQQVKDVTDLARFVPSLQFNQQGDQSAVLLTLRGIGNDSAYTEVADPEVAIY
VDGIYSPRAQGASVLMYDMERVEVLRGPQGTLFGRNATVGALSLISAKPKLGEFGGNVEV
VAGNYDRLGVRGAINIPVTDTLAFRVAFVTDRHDGYADFQPAPDVPGINRSAFITTGKKY
YAADQQSGRVSMLWQPSERFSWNLSAEGFLDNGAPVIGLLQTPRPGTKRWSTLSDTAPDT
DRYSVAVRSTMNYDVTDGIQLSYIAGWSRIGGSTQTDADAGALPPTGQVDADGNDLPLGA
FGENRTLSSRYDFQSHEVQLKSTGEQAIDWILGAYYSHEKNRIRFDIDQRNGYRDGTFSW
AGSFIQANRQIDSRAVFGQAVWHVSDALRVTGGLRYTSDKKEDIGGRNVTFSGCPATLPA
DACQGGIFGAYPNATADELAALLPGFSISSNDVKGKWDKLTYLARVDADLAEDVLGYASI
STGFKSGNIQDNAGLTDPETLTNYEVGLKSRFLDRRVTLNLAAYYSDFKGYQVNQAVTFR
DDAGNVVRSQMITQNAKGAKAYGLEAEMVANLTDSDRLQFSGTLQKTKLEELESVDGRLY
DGGKLSSIAQLKGNELAHAPRFSATLSYEHDFELASGAKITPRFTTHYETKSWLSYFNGD
ANPFVNPNDPADNMPNRGTNGTDWDRQKAYFRSDASIRFVSPDQKYSVEAFVQNIENGKI
RTGAGSFGAPRYDPVFLSNLQPPRTWGVRARANF
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaaagctttgcgctggccgcgagcaccgcgcttgcatccgcaaccttgtggatg
acccccgccttcgcacaggatgcagcgccccagacggcgcagcccgattatggcagcgac
atcatcgtgacggccacccgtcgcgaaaccacgctgcaatccacccccatcgccgtgtcc
gccttcggtcaggcgcagctcgaccggcagcaggtgaaggacgtcaccgacctcgcccgc
ttcgtcccgtcgctccagttcaaccagcagggcgaccagtcggcggtgctgctgacgctg
cgcggcatcggcaacgacagcgcctataccgaagtggcggaccccgaagtcgccatctat
gtcgacggcatctactcgccgcgcgcgcagggggcgtctgtgctgatgtacgacatggag
cgcgtcgaggtgctgcgcggcccgcagggcaccctgttcggccgcaacgcgacggtcggt
gcgctcagcctcatctccgccaagccgaagctgggcgagttcggcggcaatgtggaggtc
gtcgcgggtaattacgaccgtctgggcgtgcgcggcgcgatcaacatcccggtcaccgac
acgctggccttccgcgtcgccttcgtcaccgaccggcatgacggctatgccgatttccag
cctgcgccggacgtgcccggcatcaaccgctcggccttcatcaccaccggcaagaaatat
tatgccgccgaccagcagtcgggccgcgtctccatgctctggcagccgagcgaacgcttt
agctggaacctgtcggcggaaggtttcctcgacaatggcgcgccggtcatcggcctgctc
cagacgccgcgccccggcacgaagcgctggtcgacgctcagcgacaccgcgcccgacacc
gaccgctattccgtcgcggtgcgcagcaccatgaactacgatgtcaccgacggcatccaa
ttgagctatatcgcgggctggtcgcgcatcggcggctcgacgcagaccgatgcggacgca
ggcgctctgccgccgacggggcaggtcgacgcggacggcaacgacctgccgctcggcgcc
ttcggggagaaccggacgctctcctcgcgctacgatttccagagccatgaggtccagctc
aagtcgaccggcgaacaggcgatcgactggattttgggcgcctattacagccatgagaag
aaccgcatccgcttcgacatcgaccagcggaacggctatcgcgacggcaccttcagctgg
gcgggcagcttcatccaggcgaatcgccagatcgacagccgcgccgtcttcggccaggcg
gtctggcatgtcagcgacgcgctgcgcgtcacgggcggcctgcgctacacctccgacaag
aaggaggatatcggcgggcgcaacgtgaccttctccggttgccccgcgaccctgcccgcc
gacgcgtgccagggcggcatcttcggcgcctatccgaacgccacggcggatgaactggcc
gcgctgctgcccggtttctccatttccagcaacgatgtgaagggcaagtgggacaagctc
acctatctcgcccgcgtcgatgccgacctggcggaggatgtgctgggctatgccagcatc
agcaccggcttcaagtcgggcaatatccaggacaatgccggcctgaccgatccggaaacg
ctcaccaactatgaagtcggcctgaagtcgcgcttcctcgaccggcgcgtcacgctgaac
ctcgcggcctattatagcgacttcaagggctatcaggtgaaccaggccgtcactttccgc
gacgatgcgggcaatgtcgtgcgcagccagatgatcacccagaatgcgaagggcgccaag
gcctatggtctggaggcggaaatggtggcgaacctgaccgacagcgaccggctgcaattc
tccggcacgctccagaagaccaagctggaggaactggagagcgtcgacgggcgcctctac
gacggcggcaagctgtcctccatcgcgcagctcaagggcaatgaactggcgcatgcgccg
cgcttctccgccacgctcagctatgagcatgatttcgaactggcgagcggcgcgaagatc
acgccccgtttcaccacccattatgagaccaagagctggctgagctacttcaacggcgat
gcgaatcccttcgtcaatcccaacgatccggccgacaatatgccgaaccgcggcaccaac
ggcaccgattgggaccgccagaaggcctatttccgttccgacgcatcgatccgcttcgtg
tcgccggaccagaaatattcggtcgaagccttcgtccagaatatcgagaatgggaagatc
cgcacgggcgccggttccttcggcgcgccgcgctacgacccggtattcctgtccaacctc
cagccgccgcggacctggggcgtgcgcgcccgggccaacttctga
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