Sphingobium sp. YBL2: TZ53_10860
Help
Entry
TZ53_10860 CDS
T03855
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
syb
Sphingobium sp. YBL2
Pathway
syb03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
syb00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
TZ53_10860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
syb03021
]
TZ53_10860
03400 DNA repair and recombination proteins [BR:
syb03400
]
TZ53_10860
Enzymes [BR:
syb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
TZ53_10860
Transcription machinery [BR:
syb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
TZ53_10860
DNA repair and recombination proteins [BR:
syb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
TZ53_10860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
TmoB
IDH
Motif
Other DBs
NCBI-ProteinID:
AJR24156
UniProt:
A0A0C5XHB6
LinkDB
All DBs
Position
complement(2390088..2391152)
Genome browser
AA seq
354 aa
AA seq
DB search
MTVNMKNWQELKKPNSLEIKVAGDGKRKATFVAEPLERGFGLTLGNALRRVLLSSLQGAA
VTSIKIENVLHEFSSLAGVREDVTDIVLNIKQVALKMEGDGPRRLQLSATGPAEVRAGDI
TTVGDIEVMNPDLVICHLDQGATLNMELTADVGKGYVPAVANRPADAPIGLIPVDALYSP
VRQVAYKVDNTRVGQELDYDKLSLTVETDGTVTPEDAVAYAARILQDQLQLFVHFEDALP
VAAPAAGAAAGGSASEGESDANQINRYLLKKVDELELSVRSANCLKNDNIIYIGDLVQKT
EAEMLRTPNFGRKSLNEIKEVLSSMGLRLGMDIPGWPPENIEEMAKKLEQELLG
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgactgtcaacatgaagaactggcaggaattgaagaagcccaacagccttgagatcaag
gtcgcgggcgacggcaagcgcaaggcgaccttcgtcgccgaacctctggagcgcggcttc
ggcctgacgcttggcaacgcgctgcgccgggttcttctgtcctcgctccagggcgcggcg
gtcacctcgatcaagatcgagaacgtcctccacgaattctcctcgctcgcgggcgtgcgt
gaggacgtcacggacatcgtcctcaacatcaagcaggttgcgctgaaaatggaaggcgac
ggtccacgccgtctccagctttccgccaccggccccgccgaagtgcgcgcgggcgacatc
accaccgtgggcgacatcgaagtgatgaaccccgacctggtgatctgccacctggaccag
ggcgcgacgctgaacatggaactgaccgccgacgtcggcaagggctatgtccccgccgtc
gccaaccgtccggccgacgccccgatcggcctgatcccggtcgacgcgctctattcgccg
gtgcgtcaggtcgcgtacaaggtcgacaatacccgcgtcggccaggaactggactatgac
aagctgtcgctgaccgtcgagaccgacggcaccgtcacgccggaagacgcggtggcctat
gccgcccgcatcctgcaggaccagctccagctgttcgtccacttcgaggacgcgctgccc
gtcgccgctccggccgcaggcgccgctgccggtggttcggccagcgagggcgagagcgac
gcgaaccagatcaaccgctacctgctcaagaaggtggacgagctggaactgtcggtccgc
agcgccaactgcctcaagaacgacaacatcatctatatcggcgatctggtccagaagacc
gaggccgagatgctgcgcacccccaatttcggccgcaagtccctgaacgagatcaaggaa
gtgctgtcgtccatgggcctgcgcctgggcatggacatccccggctggccgccggaaaat
atcgaggaaatggccaagaagctcgaacaggagctgctgggctga
DBGET
integrated database retrieval system
