Sphingobium sp. YBL2: TZ53_12795
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Entry
TZ53_12795 CDS
T03855
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
syb
Sphingobium sp. YBL2
Brite
KEGG Orthology (KO) [BR:
syb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
syb03016
]
TZ53_12795
Enzymes [BR:
syb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
TZ53_12795
Transfer RNA biogenesis [BR:
syb03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
TZ53_12795
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
AJR26367
LinkDB
All DBs
Position
2797738..2798292
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AA seq
184 aa
AA seq
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MENQPGKTLFRLFFALKPTLLIARQTDHFAEAIAGGARRIAVDHQHVTLAITCDYVEYPY
AVIKALMRAGTGVMAEPFDLRLDRLSIGNRSAALRPSHSVPLLGTLQKQIAAGMKGAGVM
LRPGWSFSPHQTLFYRDGPPEQRRVDGFGWHVDRFMLICSHVGRTHHETLATWTLKGSGQ
YSLF
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaccagcccggcaagaccctcttccgcctgttcttcgccctgaagcccacattg
ctgatcgcccgccagacggatcatttcgcggaggccatcgccggcggcgcccggcgcatc
gccgtggatcaccagcatgtgacgctggcgatcacctgcgattatgtcgaatatccctat
gcggtgatcaaggcgctgatgcgcgccgggacaggcgtgatggcggaaccgttcgacctg
cggctggaccggctcagcatcggcaaccggtccgccgccctgcgtccgtcccatagcgtg
ccgctgctcggcacgcttcagaagcagatcgcggcgggcatgaaaggcgcgggggtgatg
ctgcgtcccggctggagcttcagcccgcaccagacgctgttctaccgcgacggtccgccg
gaacagcgtcgggtcgatggctttggctggcatgtcgaccggttcatgctgatatgcagc
catgtcgggcgcacgcatcatgagaccctggccacctggactctgaaaggaagtgggcag
tacagccttttctag
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