Sphingobium sp. YBL2: TZ53_13045
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Entry
TZ53_13045 CDS
T03855
Name
(GenBank) DNA glycosylase
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
syb
Sphingobium sp. YBL2
Pathway
syb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
syb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
TZ53_13045
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
syb03400
]
TZ53_13045
Enzymes [BR:
syb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
TZ53_13045
DNA repair and recombination proteins [BR:
syb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
TZ53_13045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
AJR24512
UniProt:
A0A0C5XPM0
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All DBs
Position
complement(2848972..2849589)
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AA seq
205 aa
AA seq
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MVNTAEELRASLDAIAAMEPGFAAAIGRVGYPPPRIREPGYETLLRTIVGQQVSVAAAAA
VWRKLEAELGAGCAPDALLVRDFDTLRACGLSRQKQGYARSLAELVVGGGIDLHDLPDDD
EDAIAQLVRIKGIGRWSAEIYLLFAEGRPDVWPAGDLAVQIEIGRILGLAERPSEKLTRE
LAERWRPHRGAAAIMAWHHYNTEVL
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atggtaaatacagcagaagaattgcgggccagcctggacgccatcgccgcgatggagccc
ggtttcgccgcagcgataggccgggtcggctatccgccgccccgcatccgcgagccgggc
tatgaaaccctgctgcgcaccatcgtcggccagcaggtgagcgtcgccgcggccgcagcg
gtctggcgcaagctggaggcggaactgggcgcgggctgcgcgccggatgccttgctcgtc
cgcgatttcgatacgctgcgcgcctgcggcctgtcgcggcagaagcagggctatgccaga
agcctggccgagctggtggtcggcggcggcatcgacctgcacgacctgccggacgatgat
gaggacgccattgcgcaactggtgcggatcaaggggatcgggcgctggtcggcggaaatc
tacctgctgttcgcggaaggacggccggatgtctggccggcgggcgatctggccgtgcag
atcgagatcggacggatattgggcctggccgaacgccccagcgaaaagctgacgcgggaa
ctcgccgaacgctggcgtccccatcgcggcgccgcggcgatcatggcctggcaccattat
aatacggaggttttgtaa
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