Sphingobium sp. YBL2: TZ53_13615
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Entry
TZ53_13615 CDS
T03855
Name
(GenBank) phosphoribosylglycinamide synthetase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
syb
Sphingobium sp. YBL2
Pathway
syb00470
D-Amino acid metabolism
syb00550
Peptidoglycan biosynthesis
syb01100
Metabolic pathways
syb01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
syb00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
TZ53_13615
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
TZ53_13615
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
TZ53_13615
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
syb01011
]
TZ53_13615
Enzymes [BR:
syb01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
TZ53_13615
Peptidoglycan biosynthesis and degradation proteins [BR:
syb01011
]
Precursor biosynthesis
Amino acid ligase
TZ53_13615
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Motif
Pfam:
Dala_Dala_lig_C
Motif
Other DBs
NCBI-ProteinID:
AJR24609
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Position
2945677..2946723
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AA seq
348 aa
AA seq
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MTTSPDRCMRIPAADKARLRVLFLAKHACAGGRPDAVDGNHAIYHHEMRSTLEGIGLHVA
AASRYDALFERPDADFVVTLLNRGGFQNSEMLAPLLLSWRDVPFLGASPIVRGVSDDKYL
SKLIARARGVPTMKAQLFRRGGLPGGPAFAAERLVVKPNASSASWGLAMVDGWAEALVHA
DRLFDLGHDVLVEAWAPLLDVAVPVVGGSGNAPWVLPPMMYVPADPHRERSYEEKRGLVD
AGDDPLVLVEDRDLRERLEDLTRRLLPEFWPFDYGRFEFRYDPATDALLFMELNLSCNLW
SKKTISRSARSLGVDHPALVETIVAHSLLRQGLLRQGLSADVPDRAAA
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccagccccgaccgctgcatgcgcattccggccgccgacaaggcgcggctgcgc
gtccttttccttgccaaacatgcctgcgcgggcgggcggccggacgcagtggacggcaat
cacgccatctaccatcatgagatgcgctccacgctggagggcatcggcctccatgtcgcc
gccgccagccgctatgatgccctgttcgaacggcccgatgccgatttcgtcgtcaccctg
ctcaatcgcggcggcttccagaacagcgagatgctggcgcccctgctgctgtcgtggcgc
gacgtcccctttctgggcgccagcccgatcgtgcgcggcgtgtcggacgacaaatatctg
agcaagctgatcgcgcgcgcccgcggcgtgccgaccatgaaggcgcagctcttccggcgc
ggcggcctgcccggcggccccgctttcgcggccgagcggctggtggtgaagccgaacgca
tcctccgcctcctgggggctggccatggtcgacggctgggccgaggcgctggtccatgcc
gatcgtctgttcgacctgggccatgacgtgctggtggaggcctgggctccgctgctggac
gtggcggtgccggtggtgggcggcagcggcaacgccccctgggtgctgccgccgatgatg
tacgtccccgccgacccgcatcgcgagcgcagctatgaggaaaagcgcggcctggtggat
gcgggcgacgatccgctggtgctggtcgaggatcgcgacctgcgcgagcggctggaggat
ttgacccgccgcctgctgcccgaattctggccgttcgactatggccggttcgagttccgc
tacgatccggcgaccgatgcgctgctgttcatggaactgaacctgtcctgcaatctctgg
tcgaagaagaccatttcgcgttccgcccgttcgctgggcgtggatcatcccgcgctggtc
gagaccatcgtcgcgcacagcctgttgcggcaggggctgttgcggcaggggctgtcggcc
gacgtgccggaccgggcggcggcatga
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