Sphingobium sp. YBL2: TZ53_13700
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Entry
TZ53_13700 CDS
T03855
Name
(GenBank) ATP-binding protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
syb
Sphingobium sp. YBL2
Brite
KEGG Orthology (KO) [BR:
syb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
syb03400
]
TZ53_13700
DNA repair and recombination proteins [BR:
syb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
TZ53_13700
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HerA_C
DUF87
AAA_10
FtsK_SpoIIIE
ResIII
AAA_22
SLFN-g3_helicase
TrwB_AAD_bind
AAA_30
Hydrolase
AAA_25
CbiA
AAA_7
AAA_19
T2SSE
Motif
Other DBs
NCBI-ProteinID:
AJR24623
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Position
complement(2970831..2972456)
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AA seq
541 aa
AA seq
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MSDGIFIGLGAPDKDGGIPQTLNLRRANRHGLIAGATGTGKTVTLQGIAESFSALGVPVF
LADVKGDLAGIAMAGSPTAKNADKLVARAREIGLDNYSYADNPAIFWDLYGEQGHPVRTT
VSEMGPLLLSRLMDLNETQEGVLSIAFKYADEEGLLLLDLGDLQAMLAYCAENADSLSAR
YGNVTKASVGAIQRQLLQLESQGGDHFFGEPALDIHDMLKVDEKGRGYVNVLAADRLMQS
PKLYATFLLWLLSELFETLPEVGDPDKPVLVFFFDEAHLLFDDAPKALTDKIEQVVRLIR
SKGVGVYFVTQNPIDIPEDVAGQLGNRVQHALRAFTPRDQKAIKAAAETFRVNPDLNVET
AITELKVGEALVSLLQEDGSPGIVQRTLIAPPRSRLGPLDARERAIIQSISPCAGKYDAT
VDRESAEEILAARGQAAAAAAQAAKAQAEADKAAAAQAKIEAKQREAQLKEQARQEAAAA
REAARPSSFDKAIQSATSSAASSVGRQVANEIGRAVFGGSSRRSGGIAGQLVRGILGSLF
K
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacggcattttcatcggccttggcgcgcccgacaaggacggcggcatcccccag
acgctgaacctgcgccgggccaatcgccatggcctgatcgccggcgcgaccggcacgggc
aagaccgtgacgctccagggcatagccgaaagcttctccgcactgggcgtgcccgtcttc
ctcgccgacgtgaagggcgacctggcgggcattgccatggccggctcccccaccgccaaa
aatgcggacaagctggtggcgcgggccagggagatcggcctcgacaattacagctatgcc
gacaatcccgccatcttctgggacttgtacggcgagcagggccatcccgtccgcaccacc
gtcagcgagatggggccgctgctgctttcccggctgatggacctcaacgaaacgcaggag
ggcgtgctctccatcgccttcaaatatgccgatgaggaagggctgctgctgctcgacctg
ggcgacctgcaggcgatgctggcttattgcgccgaaaatgccgacagcctgtccgcgcgc
tacggcaatgtgaccaaggccagcgtcggcgcgatccagcggcaattgctccagctcgaa
agccagggcggcgaccatttcttcggggaacccgcgctcgacattcacgacatgctgaag
gtcgatgagaaggggcgcggctatgtgaacgtcctcgccgccgacaggctgatgcagagc
cccaagctctacgccaccttcctgctctggctgctctccgaactgttcgagacgctgccc
gaggtgggcgatccggacaagccggtcctcgtcttcttcttcgacgaggcgcatctcctc
ttcgacgatgcgcccaaggcgctgaccgacaagatcgaacaggtggtgcgcctgatccgt
tccaagggcgtcggcgtctatttcgtgacgcagaacccgatcgacattccggaagatgtg
gcgggccagcttggcaatcgggtccagcacgccctgcgcgccttcaccccccgcgaccag
aaggcgatcaaggcagcggcggaaaccttccgcgtcaatccggacctgaacgtcgaaacc
gcgatcaccgaactcaaggtgggcgaggcgctggtgtcgctgctgcaggaggacggctcg
cccggcatcgtccagcgcacgttgatcgccccgccccggtcgcgcctgggcccgcttgat
gccagggaacgggcgatcatccagtccatatcgccctgcgcgggcaaatatgacgcgacc
gtcgatcgggagtcggccgaggaaatcctcgccgcccggggtcaggccgccgccgccgcc
gcgcaggccgccaaggcgcaggccgaagcggacaaggcggccgccgcccaggccaaaata
gaggccaagcagcgcgaggcccagctaaaggaacaggcgcggcaggaagccgccgccgcc
cgcgaagccgccaggccctcctccttcgacaaggcgatccagtccgcgaccagttccgcc
gcctcgtccgtcgggcgtcaggtcgccaatgaaatcggccgggcggtcttcggcgggtcc
agccgcaggtccggcggcattgcggggcaactggtgcgcggcatattgggcagcctgttc
aaataa
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