Sphingobium sp. YBL2: TZ53_13800
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Entry
TZ53_13800 CDS
T03855
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
syb
Sphingobium sp. YBL2
Brite
KEGG Orthology (KO) [BR:
syb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
syb03400
]
TZ53_13800
DNA repair and recombination proteins [BR:
syb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
TZ53_13800
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
Lon_C
AAA_16
DnaB_C
AAA_22
RecA
AAA
AAA_30
NACHT
DUF7125
Glyco_hydro2_C5
NTPase_1
nSTAND3
AAA_5
Rad51
MeaB
SLFN-g3_helicase
AAA_29
AAA_14
NPHP3_N
AAA_24
ATPase_2
PAXNEB
Motif
Other DBs
NCBI-ProteinID:
AJR24642
UniProt:
A0A0C5XPY9
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All DBs
Position
2992558..2993925
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AA seq
455 aa
AA seq
DB search
MAKAKRKFVCQQCGTVSGRWQGQCDDCGEWNSIVEEAAETVFSARHDLHSGGRALTLVGL
DDKVELPPRTTTGIAEFDRALGGGIVSGSATLIGGDPGIGKSTLLLQAAARIASAGHSVA
YISGEEASDQVRLRAQRLGLGNAPVQLASATSVRDILTTLGEGAPPALLIIDSIQTMHSD
LIEGAPGTVSQVRASSQELIRFAKQRGTALILVGHVTKDGSIAGPRVLEHMVDTVLSFEG
ERSHQYRILRAIKNRFGGTDEIGVFAMVAEGLEEVANPSALFLTHRDENVTGATVFPALE
GTRPVLVEIQALVVRLSSGATPRRAVVGWDSGRLAMVLAVLEARCGLSFSTCEVYLNVAG
GYRLSDPAADLAVAAALMSALSERPVPADVVLFGEIALSGEIRPVAHAPLRLREAAKLGF
NRAFVPAAVADGVKGISVSGYRALAQLVDQMLGRG
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggccaaggcaaagcgaaaattcgtctgtcagcaatgcggcaccgtttcgggccggtgg
caggggcagtgcgacgattgcggcgaatggaacagcattgtcgaggaagcggccgaaacg
gtcttttccgcccgccacgacctgcatagcggcggcagggcgctgacgctggtggggctg
gacgacaaggtcgaactgccgccccgcaccaccaccggcattgcggagttcgatcgggcg
ctgggcggcggcatcgtgtccggttccgccacgctgatcggcggcgatccgggcataggc
aagtcgaccctgctgttgcaggcggccgcgcgcattgcgtcggccgggcacagcgtcgcc
tatatcagcggcgaggaagcgtcggatcaggtgcgcctgcgcgcgcagcggctggggctt
ggcaatgcgcccgtgcagcttgccagcgccacttccgtgcgcgacatactgacgacgctg
ggggagggcgcgccgcccgcgctgctgatcatcgattcgatccagacgatgcacagcgac
ctgatcgagggcgcgcccggcacggtgagccaggtgcgcgcgtccagccaggaactgatc
cgcttcgccaagcagcgcggcaccgccctgatccttgtcggtcatgtgaccaaggacggc
agcatcgcggggccccgcgtgctggagcatatggtcgatacggtgctgagcttcgaggga
gagcgcagccaccaatatcgcatcctgcgcgcgatcaagaaccgcttcggcggcacggac
gagatcggcgtgttcgcgatggtggccgaggggctggaggaggtcgccaatccgtccgcc
ctgttcctgacccatcgcgacgagaatgtgaccggcgccaccgtctttccggcgctggaa
gggacgcgcccggtgctggtggagatccaggcgctggtcgtccgcctttccagcggggcc
acgccccgccgggctgtcgtgggttgggacagcgggcggctggccatggtgctggccgtg
ctggaggcgcgctgcggcctcagcttttcgacctgcgaagtctatctgaacgtcgcgggc
ggctatcgcctgtcggacccggcggccgacctggctgtcgcggccgcgctgatgtcggcg
ctgtcggagcggccggtgcccgccgatgtcgtcctgttcggggaaatcgccttgtccggc
gaaatccgcccggtggcccatgccccgttgcggttgcgcgaggcggccaagctcggtttc
aaccgcgctttcgttcccgccgccgtggccgatggggtcaagggcatttcggtcagcggt
tatcgcgcgcttgcgcaacttgttgaccagatgctcggccgcggatag
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