Sphingobium sp. YBL2: TZ53_13960
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Entry
TZ53_13960 CDS
T03855
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
syb
Sphingobium sp. YBL2
Brite
KEGG Orthology (KO) [BR:
syb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
syb03400
]
TZ53_13960
Enzymes [BR:
syb01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
TZ53_13960
DNA repair and recombination proteins [BR:
syb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
TZ53_13960
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
Motif
Other DBs
NCBI-ProteinID:
AJR24670
UniProt:
A0A0C5XJP5
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All DBs
Position
complement(3023865..3025406)
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AA seq
513 aa
AA seq
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MAAPLLIPILGDQLTPGIASLRNADPASSILLMMEVADETTYVRHHKAKIAFILSAMRHH
ADRLRALGWTVDYVKLDQPENSGSFTGEVARAVARHRPSAIHVTEGGEWRVRAMLEEWEG
RFGIPVTIHEDDRFLCSHAEFDAWAAARQQLRMEFFYRDMRRRTGLLLTEEGEPEGGQWN
FDAENRKPPPRRDLLMPQPLRFRPDPITQDVLALVAARFSDHIGSLDHFHFAVTHEDAQR
QQDHFLDQALPRFGDYQDAMLTDEPFLWHSVLSPYINAGLLDPLSLCRAVEGRYRAGRVP
LNAAEGFIRQVIGWREYVRGVYWHEGPGYGRRNALDAKRDLPGFYWTGKTDMHCMARAVG
QTIDHAYAHHIQRLMITGNFALLAGIAPVQVHVWYLEVYADAYEWVEMPNTIGMALFADG
GLLGSKPYAAGGAYINRMSDYCGRCRYDVKQRLGEDACPFNALYWDFLARNERKLARNPR
LAMPYRNWNRMSVEDRAALRKQAARFLDGLGTG
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atggctgcccccctcctcatcccgatcctcggcgaccagctgacgcccggcatcgcgtcg
ctccggaacgccgacccggcaagcagcatcctgctgatgatggaggtagcggacgaaacc
acctatgtccgccatcacaaggccaagatcgccttcatcctctccgccatgcgccatcat
gccgatcggttgagggcgctcggatggacggtcgactatgtgaagctcgaccagccggaa
aacagcggcagcttcaccggggaggtcgcccgcgccgtcgcacgccaccgtccctccgcc
atccacgtcacggagggcggcgaatggcgcgtccgcgcgatgctggaggaatgggaaggc
cgcttcggcatccccgtcaccatccatgaggatgaccgcttcctctgctcccatgccgaa
ttcgatgcctgggcggcggcgcgccagcagctcaggatggaatttttctaccgcgacatg
cgccgcaggaccgggctgttgctgacggaagagggcgaacccgaaggcggccagtggaat
ttcgacgcggaaaaccgaaaaccgccgccccggcgcgacctgttgatgccgcagccgctc
cgcttccgccccgacccgatcacgcaggacgtgctggcgctggtcgcggcgcgtttttca
gaccatatcggctcgctcgaccatttccacttcgccgtcacgcatgaggatgcgcaacgc
cagcaggaccatttcctcgaccaggccctgccccgcttcggggactatcaggacgcgatg
ctgaccgatgagccattcctctggcactcggtcctgtcgccctatatcaacgccggactg
ctcgacccgctgtcgctctgccgggcggtggaggggcgataccgcgccggcagggtcccg
ctcaacgcggcggagggcttcatccggcaggtcatcggctggcgcgaatatgtgcgcggg
gtctattggcacgaaggccccggctatggccgccgcaacgcgctggatgcgaagcgcgac
ctgcccggcttctactggacgggcaagaccgacatgcactgcatggcccgggcggtcggc
cagaccatcgaccacgcctacgcccatcatatccagcgactgatgatcaccggcaatttc
gccctgctcgccgggatcgcccccgtgcaggtgcatgtctggtatctggaggtctatgcc
gacgcctatgaatgggtggaaatgcccaacaccatcggcatggcgctgttcgcggacggc
ggcctgctggggtcgaaaccctatgcggcgggcggcgcctatatcaaccgcatgtcggat
tattgcggccggtgccgctatgacgtgaagcaacgcctcggcgaggacgcctgccccttc
aacgcgctctactgggactttctggcccgcaacgagcggaagctggcgcgcaatccgcgc
ctcgccatgccctatcgcaactggaaccggatgagcgtggaggaccgcgccgccctcagg
aaacaggcggcgcggttcctcgacggattgggcaccggttag
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