Sphingobium sp. YBL2: TZ53_14375
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Entry
TZ53_14375 CDS
T03855
Symbol
ndk
Name
(GenBank) phosphodiesterase
KO
K00940
nucleoside-diphosphate kinase [EC:
2.7.4.6
]
Organism
syb
Sphingobium sp. YBL2
Pathway
syb00230
Purine metabolism
syb00240
Pyrimidine metabolism
syb01100
Metabolic pathways
syb01110
Biosynthesis of secondary metabolites
syb01232
Nucleotide metabolism
syb01240
Biosynthesis of cofactors
Module
syb_M00049
Adenine ribonucleotide biosynthesis, IMP => ADP,ATP
syb_M00050
Guanine ribonucleotide biosynthesis, IMP => GDP,GTP
syb_M00052
Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP
syb_M00053
Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
syb_M00938
Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Brite
KEGG Orthology (KO) [BR:
syb00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
TZ53_14375 (ndk)
00240 Pyrimidine metabolism
TZ53_14375 (ndk)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
syb04131
]
TZ53_14375 (ndk)
Enzymes [BR:
syb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.6 nucleoside-diphosphate kinase
TZ53_14375 (ndk)
Membrane trafficking [BR:
syb04131
]
Exocytosis
Calcium ion-dependent exocytosis
Kinases and associated proteins
TZ53_14375 (ndk)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NDK
Motif
Other DBs
NCBI-ProteinID:
AJR26397
UniProt:
A0A0C5XUN7
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All DBs
Position
complement(3117994..3118416)
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AA seq
140 aa
AA seq
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MAVTRTFSIIKPDATRRNLTGAVTKKLEEAGLRVVASKRIRMSREQAEGFYAVHKERPFF
ADLVAFMISGPVVVQVLEGEDAVKRNRDIMGATNPANADEGTIRKEYAESIEANSVHGSD
SEENAAIEIAYFFKPDEIVG
NT seq
423 nt
NT seq
+upstream
nt +downstream
nt
atggccgtgacccgcaccttttcgatcatcaagcccgacgcgacccgtcgcaacctgacg
ggcgccgtgaccaagaagctggaggaagcgggcctgcgcgtcgtcgcttccaaacgcatc
cgcatgagccgcgagcaggccgagggcttctacgccgtgcacaaggaacgccccttcttc
gccgatctggtcgcgttcatgatctccggcccggtggtcgtgcaggtcctggaaggcgag
gacgccgtgaagcgcaaccgcgacatcatgggcgccaccaaccccgccaatgccgatgag
ggcaccatccgcaaggaatatgccgaatcgatcgaagccaattcggtccatggttccgac
agcgaggaaaatgccgcgatcgagatcgcctatttcttcaagccggacgaaatcgtcggc
tga
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