Sphingobium sp. YBL2: TZ53_14875
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Entry
TZ53_14875 CDS
T03855
Name
(GenBank) dihydrolipoamide dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
syb
Sphingobium sp. YBL2
Pathway
syb00010
Glycolysis / Gluconeogenesis
syb00020
Citrate cycle (TCA cycle)
syb00260
Glycine, serine and threonine metabolism
syb00280
Valine, leucine and isoleucine degradation
syb00310
Lysine degradation
syb00380
Tryptophan metabolism
syb00620
Pyruvate metabolism
syb00630
Glyoxylate and dicarboxylate metabolism
syb00640
Propanoate metabolism
syb00670
One carbon pool by folate
syb00785
Lipoic acid metabolism
syb01100
Metabolic pathways
syb01110
Biosynthesis of secondary metabolites
syb01120
Microbial metabolism in diverse environments
syb01200
Carbon metabolism
syb01210
2-Oxocarboxylic acid metabolism
syb01240
Biosynthesis of cofactors
Module
syb_M00009
Citrate cycle (TCA cycle, Krebs cycle)
syb_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
syb_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
syb_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
syb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
TZ53_14875
00020 Citrate cycle (TCA cycle)
TZ53_14875
00620 Pyruvate metabolism
TZ53_14875
00630 Glyoxylate and dicarboxylate metabolism
TZ53_14875
00640 Propanoate metabolism
TZ53_14875
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
TZ53_14875
00280 Valine, leucine and isoleucine degradation
TZ53_14875
00310 Lysine degradation
TZ53_14875
00380 Tryptophan metabolism
TZ53_14875
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
TZ53_14875
00670 One carbon pool by folate
TZ53_14875
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
syb04147
]
TZ53_14875
Enzymes [BR:
syb01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
TZ53_14875
Exosome [BR:
syb04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
TZ53_14875
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
FAD_oxidored
GIDA
FAD_binding_2
Pyr_redox_3
NAD_binding_8
AlaDh_PNT_C
HI0933_like
Thi4
FAD_binding_3
Lys_Orn_oxgnase
3HCDH_N
Motif
Other DBs
NCBI-ProteinID:
AJR24814
UniProt:
A0A0C5X6P8
LinkDB
All DBs
Position
3222585..3223985
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AA seq
466 aa
AA seq
DB search
MADFDYDVLVIGAGPGGYVAAIRAAQLGLKTACAESRETLGGTCLNVGCIPSKALLHASE
LYEEAANGALAKLGVKIDKMSLDLDTMQGQRKEAVKGLTGGIEYLFKKNKVDWLRGLASF
TGANTVEVAGKTVTAKNIVIATGSSVTPLPGVAVDNAGGRIVDSTGALELDKVPGHLVVV
GGGVIGLELGSVWRRVGAKVTVVEFLDQILPGMDGEVRKEANKIFKKQGFEYKLGTKVTS
AEVGKKGVTLTVEPAAGGEAEKIEADVVLVSIGRRPNTEGLGLDKIGLELNARGQIETDH
DFATKVPGVWAIGDVIPGPMLAHKAEDEGIAVAENIAGLTGIVNHDVIPSVVYTKPEIAG
VGLTEEAAKEKGAIKVGKFPMLANSRAKTNHEPDGFVKIIADAETDKVLGVWIIATVAGT
MIAQAAQAMEFGASSEDIAYTCHAHPTHSEAIKEAAMAVTGKPIHI
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atggcagacttcgattatgatgttctggtgattggcgccggtcccggtggttatgtcgcg
gcgatccgcgcggctcagctcggcctcaagaccgcctgcgccgaaagccgcgagacgctg
ggcggcacctgcctcaatgtcggttgcattccgtccaaggcgctgctgcacgcttcggaa
ctgtatgaggaagccgccaatggcgccctcgccaagctgggcgtgaagatcgacaagatg
agcctggacctcgacaccatgcagggccagcgcaaggaagcggtgaagggcctgaccggc
ggcatcgaatatctgttcaagaagaacaaggtcgactggttgaggggtctggcgagcttc
accggcgccaacaccgttgaagtcgcgggcaagacggtgacggcgaagaacatcgtcatc
gccaccggctcgtcggtcacgccgcttccgggcgttgcggtagacaatgcggggggcagg
atcgtcgattcgaccggcgcgctggaactggacaaggttcccggccatctggtcgtcgtc
ggcggcggggtcatcgggctggaactgggttcggtatggcgtcgcgtcggtgcgaaggtc
acggtggtcgagttcctcgaccagatcctgccgggcatggacggcgaagtccgcaaggaa
gcgaacaagatcttcaagaagcagggcttcgaatataagctcggcaccaaggtcacgagc
gcggaagtcggcaagaagggcgtgaccctgaccgtcgagccggccgccggcggcgaggcg
gagaagatcgaggccgatgtggtgctggtgtcgatcggccgtcgtccgaacacggagggg
ctgggtctcgacaagatcggtctggaactcaatgcccgtggccagatcgagaccgatcat
gacttcgcgaccaaggttcccggcgtctgggccattggcgacgtcatccccggcccgatg
ctcgcgcacaaggccgaggatgaaggcattgccgtggccgagaatatcgcgggcctgacc
gggatcgtgaaccatgacgtgatcccgtcggtggtctataccaagccggagatcgctggc
gtgggcctgacggaagaggccgccaaggaaaagggcgcgatcaaggtcggcaaattcccg
atgctggcgaacagccgcgccaagaccaaccatgagcccgatggcttcgtgaagatcatt
gccgatgcagaaaccgacaaggtgctgggcgtctggatcatcgcgacggttgcgggcacg
atgatcgcgcaggcggcgcaggcgatggaattcggcgcttcgagcgaggacattgcctat
acctgccacgcgcatccgacgcatagcgaggcgatcaaggaagcggccatggccgtgacg
ggcaagccgatccacatctga
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