KEGG   Sphingobium sp. YBL2: TZ53_15250
Entry
TZ53_15250        CDS       T03855                                 
Name
(GenBank) type II secretion system protein D
  KO
K02453  general secretion pathway protein D
Organism
syb  Sphingobium sp. YBL2
Pathway
syb03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:syb00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    TZ53_15250
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:syb02044]
    TZ53_15250
Secretion system [BR:syb02044]
 Type II secretion system
  General secretion pathway protein
   TZ53_15250
SSDB
Motif
Pfam: Secretin Secretin_N type_II_gspD_N0
Other DBs
NCBI-ProteinID: AJR24882
LinkDB
Position
3299915..3302101
AA seq 728 aa
MTRKLLLSAAMALALAAPIASPVMAQQTLNVRDADIRAFIQDAARVTGRTFIIDNRVAGK
VSVVTDRPLSRSEYFEIFLSTLRANGLVAVPAPGGAYRIQPADGAAGQPSAVGRAANRNQ
FVTEVFRLRSIDAASALETLRPLVSKDGSVTANRAGNSVVVADYADNIGRIRQVIARIDR
DTASTTTVVLKNAGAREIATSLQALVTTGGEGAAKPATIVPIDSSNAVAIRGDAGTVARL
AQMARDLDRQAASGTEIRVYWLEHADAEKLLPVLQQLVGQATASPVTASTPAAGTAPSAA
PAAASTAVAGPGSSGGNGISSRGPAIVTRYEGANAIIVAANSDVQRMLGETIRQIDTRRE
QVLVEAIIVEISDAAAKKLGVQFLIGSTKTGFAATNYSNASPNILTLAGAIAADRLGETT
TTVVAPDGTRTETRTRENGDLANTLQQAAVDSLMNATGGFGGVATSLGRNGIFGAIINAV
KSDTDSNILSTPSVMTLDNQKASILVGQQVPVTTGEALSQNFDNQFRTVQRQDVGIKLEV
KPQINTGGAIKLFLKQEVSSVAGPVSNNNSDLIINKREIETTVTVDDGEILALGGLLDDN
ERKTIERIPLLSDIPGIGELFKSRSKSRTKTNLMVFIRPTILRSKEDAQKLTQQRYGYIR
GMQLQRNPEQEPGIDELVRDYMGAMPPSAAPQPGDAVVQPPAEIIEPTARQSSGVVRPVD
IPESEQPK
NT seq 2187 nt   +upstreamnt  +downstreamnt
atgaccagaaaactgcttctttccgccgccatggccctcgcgctggcggctcccatcgca
tcgccggtcatggcgcagcagacgctgaacgtgcgcgacgccgacatccgcgccttcatc
caggatgcggcgcgggtgaccgggcggaccttcatcatcgacaaccgcgtggccggaaag
gtgtccgtggtgaccgaccggccgctgtcgcgatccgaatatttcgagattttcctgtcg
acgctgcgggcgaacgggctggtggcggtgccggcgccgggcggcgcctatcgcatccag
ccggcggacggcgcggcgggccagcccagcgccgtgggccgcgcggccaatcgcaaccag
ttcgtgacggaggtgttccgcctgcgctccatcgacgcggcgagcgcgctggaaacgctg
cggccgctggtcagcaaggatggctccgtgacggcgaaccgggccgggaacagcgtggtc
gtggcggactatgccgacaatatcgggcgcatccggcaggtgatcgcgcggatcgaccgg
gatacggcctcgaccaccacggtcgtgctgaaaaatgccggggcgcgggagatcgcgacg
tccctgcaggcgctggtgacgacgggcggggaaggggcggcgaagcccgcaaccatcgtg
cccatcgacagcagcaatgccgtcgcgatccgtggcgatgccgggacggtggcgcggctg
gcgcagatggcgcgcgacctcgaccggcaggccgcgagcgggaccgagatccgcgtctac
tggctggaacatgccgatgccgaaaagctgctgccggtgttgcagcaactggtggggcag
gcgaccgcttcgcccgtgaccgcctccacccccgcggcgggaaccgcgccctccgcggcg
ccagccgccgcttcaaccgcggtggcggggccgggcagctcgggcggcaacgggatttcg
tcgcgcgggcccgccatcgtgacccgctatgagggcgccaatgcgatcatcgtcgcggcc
aacagcgacgtgcagcggatgctgggcgagacgatccgccagatcgacacaaggcgcgaa
caggtgctggtggaggcgatcatcgtcgagatcagcgacgccgccgccaagaagctgggc
gtgcaattcctgatcggcagcaccaagacgggttttgccgcgaccaattattccaatgct
tcacccaatatcttgacgttggcaggcgcgatcgccgccgatcggctgggcgagacgacg
acgaccgtcgtggcgccggacggcacccgaacggagacgaggacgcgggaaaatggcgac
cttgccaatacgctgcaacaggcggcggtcgacagcctgatgaacgcgaccggcggcttc
ggcggggtggcgacgtcgctcgggcggaacgggattttcggagcgatcatcaatgctgtc
aaatccgataccgacagcaacatcctgtccacgccttctgtgatgacgctggacaatcag
aaggcgtcgatactggtcggccagcaggtgccggtgaccacgggcgaggcgctgagccag
aatttcgacaaccagttccgcaccgtccagcggcaggatgtcggcatcaagctggaggtg
aagccccagatcaacactggcggcgcgatcaagctgttcctgaagcaggaggtgtccagc
gtcgccgggccggtgtcgaacaacaacagcgacctcatcatcaacaagcgtgagatcgag
acgaccgtgacggtcgacgatggcgagatattggcgctgggcggcctgctggacgacaat
gagcgcaagacgatagagcgtattccgctgctgtccgacattcccggcatcggcgaactg
ttcaagtcgcgcagcaagagccggaccaagaccaacctcatggtcttcatccgccccacc
atattgcgttcgaaggaagatgcgcagaagctgacgcagcagcgctacggctatatccgc
ggcatgcagttgcagcgcaacccggaacaggagccgggcatagacgagctggtgcgcgac
tatatgggcgcgatgcctccctccgccgcgccgcagccgggcgacgccgtggtgcagccg
cccgccgagatcatcgaaccgaccgcccgccagtcgagcggggtggtgcggcccgtggac
atcccggaaagcgagcaaccgaaatga

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