Sphingobium sp. YBL2: TZ53_15955
Help
Entry
TZ53_15955 CDS
T03855
Name
(GenBank) pseudouridine synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
syb
Sphingobium sp. YBL2
Brite
KEGG Orthology (KO) [BR:
syb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
syb03016
]
TZ53_15955
Enzymes [BR:
syb01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
TZ53_15955
Transfer RNA biogenesis [BR:
syb03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
TZ53_15955
Prokaryotic type
TZ53_15955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
LmeA
TruB_C
Motif
Other DBs
NCBI-ProteinID:
AJR24997
UniProt:
A0A0C5XR08
LinkDB
All DBs
Position
3441579..3442496
Genome browser
AA seq
305 aa
AA seq
DB search
MHGWIILDKPLGLGSTQAVSAVKRALRQSGAGKWKVGHGGTLDPLATGVLPIAVGEATKL
AGRMLDSDKIYDFTIGFGLQTDTLDLEGREIATSLHRPTLAEVQAVLPRFTGPIEQAPPA
YSAILIDGRRAYDLARKGEEVEMKTRAITIHNLAISPPQGPAKPGEGEGGAEIGEITLRA
HVSKGTYIRSLARDIARALGTVGHVTMLRRIKAGPFTLQSAISLDKLDEAARGGDIAQLM
LPLTAGLDDIPALAVSPDDALALRQGKVLVGKPHTGLMLAMEGETPVALVEASGPEVRVV
RGFNL
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgcacggctggatcatcctcgacaaacccttgggactaggctccacccaggcggtgagc
gcggtgaagcgcgccctgcgccagagtggcgcgggcaagtggaaggtgggccatggcggc
acgctcgacccgctggcgacgggcgtgctgccgatagcggtgggggaagcgaccaagctc
gccggacggatgctggacagcgacaagatctacgatttcactataggtttcggcctccag
accgacacgctggaccttgagggccgggaaatcgccaccagcctgcatcgccccacgctg
gcggaggtgcaggcggtcctgccccgcttcaccggcccgatcgagcaggcgccgcctgcc
tacagcgcgatcctgatcgacggccggcgcgcctacgaccttgcccgcaagggggaggag
gtcgagatgaagacccgcgccatcaccatccacaacctcgccatatccccgccccagggg
ccagcgaagcctggagaaggggagggcggcgcggagatcggcgaaatcaccctgcgcgcc
catgtttcgaagggcacctatatccgttccctcgcccgcgacatcgcgcgcgcgctcggc
actgtcggtcatgtcaccatgctgcgccgcatcaaggccggccccttcaccctgcaatcc
gcgatttcgctggacaaattggacgaagctgctaggggcggcgacatcgcgcagctcatg
ctgccgttgacggcggggctggacgacatcccggctctcgcagtctctcccgacgatgcg
ctcgctctccgacaggggaaggtgctcgtggggaaaccgcataccggcctgatgctggcg
atggagggcgaaacgcccgtcgcgctggtcgaagccagtggcccggaggtccgggtggtg
cgcggctttaatctctaa
DBGET
integrated database retrieval system
