Sphingobium sp. YBL2: TZ53_16085
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Entry
TZ53_16085 CDS
T03855
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
syb
Sphingobium sp. YBL2
Brite
KEGG Orthology (KO) [BR:
syb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
syb02000
]
TZ53_16085
Transporters [BR:
syb02000
]
Other transporters
Pores ion channels [TC:
1
]
TZ53_16085
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
OMP_b-brl_3
Plug
Motif
Other DBs
NCBI-ProteinID:
AJR25018
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Position
3475588..3477957
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AA seq
789 aa
AA seq
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MQKFLSVRRAALLLSCCVGLVSPHAWAQEPDADDDAGTITVTGRRISQSSEAIGEDKVSN
VVAVTREALLSAPSGISGLKMLEQLPGFNVQTDGALGLYEFGNSVQTRAFNLDQIGFVVD
GIPTGRSDAFGGSPVFRYVDNENLGVVEAAIGAGDVGLPSYSTLGPVVQYNSIAPQDEMG
LFVSQSFGDFDMKRTFIRASTGRVGPFKAYVSRTKLDSDLWRGPGSVDREHWEAQVHADL
GGDSWARFKFVSNDFFDYDSPTISRGQYNCTVKSVVGACGRDFAYIENVPNTTPGFAPTV
PGVYYSNSNYAQVYNLAINVRKDKLYGATFHAGIAEGVWAESTLYWEDKGGYGVSPDTYA
NSLSRYNGQVAVGLPVVAPRGVEFGRSGVGGDRYGITSKLHWEMGVNTIEAGVWAETDKY
HRTQARYNTVNGAPDGAPLLNELVYLRRDYRSQRDTLQVFLKDTLKLADEALVLDLGFKG
LMLDYSYRGYRDFDDYYRTVGGRFVPGYGVSYNNAHYKDMFLPMAGVLYKLDGRTQLFAS
YAENMALPKGMDDIYSVIRPLGALVPQPAPERSTNMEFGIRTNQGQLYASLAGFYTKFKN
RIQSITTILPGSGGAATETFFQNVGRVRAYGLEFSGTYKPAFLDGLAYGNLNVTYNNAKF
KDDIPAATPILIADKYIPDSAKWIVSGGVTVEPASWLVANISGKYTSRRWSTFTNAAGSS
IPGFTVFNAYVDIGDGWSFGPLKSIKARLNVDNIFDKDRLSFISSSVTGDGFFRPLSPRT
FQFTISGEI
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaagttcttgtccgtccgtcgtgccgcattgctgctttcctgttgcgtcggtctt
gtctcaccccatgcctgggcgcaggagcccgatgcggatgacgatgccggcacaatcacc
gttaccggccgccgcatttcccagtcatcggaagcgatcggtgaggataaggtgagcaat
gtggtggcggtcacgcgtgaggccttgctgtcggcgccctccggtatttcgggcctgaag
atgcttgagcaactgcccggcttcaacgtgcagacggacggcgctctcggcctctacgag
ttcggcaacagcgtccagacccgtgccttcaacctcgatcagatcggtttcgtggtggac
ggcattcccacgggacgcagcgacgccttcggcggaagcccggttttccgctatgtcgac
aatgagaatctgggcgttgtggaagccgccatcggcgcaggcgacgtcggcttgcccagc
tattcgacattgggccctgtcgtccaatataacagcatcgcgccgcaggacgagatgggc
ctgttcgtttcccaaagcttcggcgacttcgacatgaagcgcaccttcatccgcgcgagc
actgggcgggtgggaccgttcaaggcctatgtcagccgcacgaagctggacagcgacctg
tggcgcggccccggatcggtcgaccgcgaacattgggaggcgcaggtccatgccgacctc
ggcggcgatagctgggcgcggttcaaattcgtgtcgaacgacttcttcgactatgactcg
cctaccatttcgcggggccaatataattgcactgtgaagagcgtggtcggcgcctgcggt
cgtgacttcgcctatatcgaaaatgtgcccaatacgacccccggctttgcgccgacggtg
ccgggtgtctattactccaactccaactatgcccaagtttacaaccttgccatcaatgtg
cgtaaggacaagctttatggcgctactttccatgccggtattgcagaaggcgtctgggcg
gaatcgacgctctattgggaagacaagggtggctatggcgtgtcgcccgacacctatgcc
aattcgcttagccgctataatggtcaggtcgccgtcggcctgcctgtggtagctccgcgg
ggcgtcgagttcggccgttcaggcgtcggcggcgaccgctacggcatcacgtccaagctg
cattgggaaatgggggtcaacacgatcgaggccggcgtctgggcagagaccgataaatat
catcgcacccaagcccgttataatacggtcaacggcgctcccgacggtgcgcctctgctg
aacgaactggtctatctgcgccgtgactatcggtcgcagcgcgatacgctacaggtcttc
ctgaaggatacgctcaagctggcagatgaggcgctggtgctcgacttgggcttcaagggg
ctgatgcttgactatagctaccgtggctatcgcgatttcgacgattattatcgcaccgtc
ggtgggcgtttcgtcccaggctatggcgtcagctacaacaatgcccattacaaggacatg
ttcctgccgatggccggtgtgctctataagctggatgggcgcacgcagctcttcgcatcc
tacgcggaaaacatggccctgcccaagggaatggacgatatttattccgtcatccgcccg
cttggggccctggtcccgcagcccgctccggaacgttcgaccaacatggaattcggcatc
cgcactaatcagggccagctttacgcctcgcttgcgggcttctacacgaagttcaagaac
cgcatccaatcgatcaccacgatcctgccgggcagcggcggtgcggccacagaaaccttc
ttccagaatgttggccgcgttcgtgcatatggcctggagttcagtggcacctacaagccc
gctttccttgatggtcttgcctatgggaatctcaacgtcacctacaacaatgccaagttc
aaggatgacattccggctgccacgccgatcctgatcgctgataaatatatccccgacagc
gcaaaatggatcgtcagcggcggcgtgacggttgagccggcaagctggttggtcgccaac
atatccggcaaatatacctctcgtcgctggtcgacatttaccaatgcggccggatctagc
ataccgggcttcaccgtattcaacgcctatgtcgacatcggcgacggctggagcttcggc
ccgctcaagagcatcaaggcacggctcaacgtcgataatatcttcgataaagacagattg
tcctttatctcctcttccgtgacgggcgacggtttcttccggccattgtccccacgcact
ttccagttcaccatttcgggcgagatttga
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