Sphingobium sp. YBL2: TZ53_16100
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Entry
TZ53_16100 CDS
T03855
Name
(GenBank) hypothetical protein
KO
K20276
large repetitive protein
Organism
syb
Sphingobium sp. YBL2
Pathway
syb02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
syb00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
TZ53_16100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_13
Big_6
HemolysinCabind
Big_3_5
DUF6209
Big_3_3
DUF6802
bMG3
Mo-co_dimer
Motif
Other DBs
NCBI-ProteinID:
AJR26448
UniProt:
A0A0C5XZ39
LinkDB
All DBs
Position
3480928..3486348
Genome browser
AA seq
1806 aa
AA seq
DB search
MLREGDDLILHFADGTAVRLEGYFNCPPGDIADLIFLEPGNGQQWLTDLGSEACYLPTDT
TTEALSYSFAPAGAAGGLSGGLLAGLGAVAAGIGVAAAAGGGGGGGGGPDGGTAVDSTPP
AAPTVAPTNGRSLSGSAEAGSTVRIDVNGDGSVDATATADNAGRWSYTPATPIGDGVTVR
VTAVDAAGNASPSTSVTVDAAAPPAPVINPSNGTALGGTAEAGATIGLDLDGDGDVDATT
TADASGNWNYTPSTPIPDGTTVTAVATDAVGNSSAPASIDIDAVPPAAPLVDPSNGTELT
GTAEPGATVGIDSDGDGTIDTTVPVDDQGNWSHVPATPIADGTTVEVVATDPSGNTSSPA
TVVVDATAPAIPVVGTVVDDAGTTTGPVANGGSTDDTTPTLSGSGVEASAIVSVYDGGAL
LGTVVADTSGNWNFTPTAPLLEGTHSFTVTATDGTGNVSAASAAYVLTVDTSAPAAPLLA
PTDGTTVSGSAEAGATIDLDTDGDGLSDATTVADASGDWSITLASPLANGTVISAIATDA
AGNSSTPDTVTVDTGLDTTPPAIPTIGAVADDVGAILGAVANGGITDDATPTLSGTGVEA
NAIVSVYDGGTLLGTAAVDGSGNWNFTPTAPLGEGTHSLTVTATDAAGNVSAASAAYVLT
VDTSAPATPVLAPTDGTTISGTAEAGATIALDTDGDGISDETTTVDASGDWSITLASPLA
NGTVVTAIATDGAGNSSPPDTVTVDTGLDTTPPAIPGIGGVADDVGAILGPIANGGSTDD
TVPTLSGTGVEANAIVSVYDGSTLLGTTSADGSGNWSFAPTAPLGEGAHSFTVTATDAAG
NVSAASAAYVLTVDTSAPAAPILAPSDGTTLSGIAEAGAIIDLDTDGDGVFDETTTADAS
GDWSITLASPLANGTVVNAIATDAAGNSSLAGAVTVNTGLDTTPPAVPSIAAVADDAGSI
LGPVANGGITDDATPTLSGIGVEANAIISVYDGSTLLGTAMAAALGNWSFTPTTPLGAGS
HSFTVTATDAAGNESAASAAYALTVDTVASIPTITGMTDNAGSVFGGVISGGTTDDTTPT
LSGTGAEANASISIYDGNMLLGTATADASGNWSFTPTTPLGEGLHSFTATATDAAGNVSL
ASAAYAVTIDLTLPPVPTITGASDNAGSILGGVISGGSTDDTTPTLSGTGAEANGTVSVY
DGSTLLGTATADVSGNWNFTPTAPLGEGPHSFTAVGVDAAGNASIASAPYALTIDLTVPA
APTITGVSDNVGSVLGAVALGGATDDTTPTISGTGAEANANVSVYDGGTLLGTATADGSG
NWNFTPTAPLGNGPHSFTAVVTDAVGNAGLASAPYAIAIDTVAPTATVAITALRDDTQVV
GDWATDDTSPTITGTLSAPLAGGERVEVSLDGGATWTQAATSGTSWSYGPGTLGAGGHVV
DVRVVDAVGNVGSTAAQPITITNVNDAPIVLASDSSLLGLVSAEALGLLDIGSQAFVAID
PENSLQSVVLDFTPLLTVGTQVFTVSQDLATELGLAVNVNNQFVTVLGTPVSTISSTMTI
TALDGGPIDNMAINELLRAVHFNSPLGLNVNLLSGISITATDTAGASRTDNAASLLDANL
LNTLLGGSSDPTILEGTAGVNILTGTAANEHLYGYGGADILQGGGGNDILRGGAGADTLD
GGTGNDILLFDAADTLIDGGAGADALLVRGDSSVSLNLDAATNIRNMERIDLGAGDTGHS
LTLTEAGIIQATDANRQLIITGENNDSVTMTGAVHVGQALVDNHAYEQYSLGTTTVLIED
PVLVVV
NT seq
5421 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgtgaaggggatgatctgatcctgcattttgccgacggtacggcggtccggctg
gagggttatttcaattgtccgccgggagacattgccgaccttattttcctcgaaccaggc
aatgggcagcagtggctgaccgatctgggcagcgaagcctgttatctgcccaccgacacg
accaccgaagccctgagttattccttcgcccccgcaggcgctgcggggggtctgagcggc
ggcctgctggcgggattgggggcggtggcagccggcatcggcgtcgcggctgctgctggc
ggcggcggtggtggtgggggtgggccggatggcgggacggctgtggatagcacgcccccg
gcagcgccgaccgtggcgccgacaaatggccgtagcttgtcgggctctgcggaagcgggt
tcgacggtgcgcatcgacgtcaatggcgacggctcggtcgatgcgacggccaccgctgac
aatgccggccggtggagctatacgccggccacgcccatcggcgatggcgtgacggtgcgg
gtaacggcagtggatgctgcgggcaatgcgtcgccatcgaccagcgtgacggtggacgcg
gccgctccgccggcgccggtgatcaatcccagcaacggcacggcgctcggcggtacggct
gaggcaggggccacgatcgggctggatctggatggcgacggcgacgtcgatgcgacgacc
acggccgatgcgtctggtaactggaactatacgccttcgacgccgattccagatgggacg
acggtaacggccgttgcgaccgatgcggtgggaaacagctccgcgcctgccagcatcgac
attgacgccgtgccccccgccgctccgctcgtcgatccgagcaacgggaccgaattgacc
ggaacggcggagcccggcgcgactgtcggcatcgatagcgatggcgacggcactatcgac
acgacggttcctgtcgatgaccaaggcaattggagccatgtgccggcgacacccattgcc
gacggcacgacggtggaggtcgttgcgaccgatccatccggcaacacatcgtcccctgcg
acggtcgtggtcgacgccactgcgcctgcgatccccgtggtgggcactgtagtcgacgat
gccggcacgacgactggccctgtcgccaatgggggcagcacggatgatacgacgccgacg
ctttcgggaagcggggtagaggcgagcgccatcgtctctgtctatgacggcggcgcgttg
cttgggacagtcgttgcggacacctccggcaactggaacttcacgcccaccgcgccactg
ttggaagggacgcacagcttcaccgtcacggcgacggatgggacgggcaatgtcagcgcg
gcgtccgccgcctatgtcctgaccgtcgacaccagcgccccggctgcgccgctgctcgcg
cctaccgacgggacgacggtttcgggctcggcggaggccggggcgaccatcgatctcgac
acggatggcgacggcctgtccgatgcgacgacggtcgcggatgcatcgggtgactggagc
atcaccttggcttcgccgctggcgaacggtacggtgatcagcgccatcgccacggatgcg
gcgggcaacagctccacgcccgatacggtgaccgtcgataccggactcgacactactccc
cccgccattccgaccatcggcgccgtagccgacgatgtcggcgcgatccttggcgctgtc
gccaatggcgggatcactgacgatgcgacgccaacgctgtccggaaccggcgtcgaagcg
aatgccatcgtctccgtttacgacggcggcacgctgctgggcacggccgcggtggacggt
tcgggcaactggaacttcactcccaccgcgccgctgggtgagggaacgcatagcctgacc
gtcacggcaaccgacgcggcgggcaatgtcagcgcggcatcggccgcctatgtcctgacc
gtcgataccagtgctccggcaacgcctgtgcttgccccgaccgacggcacgacaatatcg
ggcactgcggaggctggagcgaccatcgctctggataccgacggtgacggcatatccgac
gagacgacgacggtggacgcatcgggcgattggagcattacgctggcatcgccgctcgca
aatggaacggtggtgaccgccatcgctaccgatggggcaggcaacagctcaccccccgat
acggtgaccgtcgatacaggtctggatacgactcctccagccattcccggaattggcggc
gtagccgatgatgtcggcgcgatcctgggccccatcgccaatggcggcagcacggatgac
acggttccgaccctctcgggaacgggcgtggaggcgaatgccattgtctccgtctacgac
ggcagcaccttgctgggtacgacgagcgcggacggttcgggcaactggagcttcgcgccc
accgcgccgctgggcgagggggcgcacagcttcaccgtcacggcgaccgacgcggcaggc
aatgtcagcgcggcgtctgccgcctatgtgctgaccgtcgacaccagcgctccggccgcg
ccgattctggccccctccgacggaaccacgctatcgggtatcgcggaagccggcgcgatc
atcgacctcgacaccgatggcgatggcgtgttcgatgagaccacgaccgcggacgcctcg
ggcgattggagcatcaccctggcttccccgctggcgaatggaacggtcgtcaacgcgatt
gcgaccgatgccgcgggcaatagctcgcttgccggtgcagtgaccgtcaataccggcctc
gacaccacgccgcctgcggtgccgtcgatagcggcggtggccgacgatgcggggtcgatc
ctaggccctgtcgccaatggcgggatcacggacgatgcgacgcctaccctgtcgggaatc
ggggtcgaggcgaatgccattatttcggtctatgacggcagcaccctgctcggcacggcg
atggcggccgctttgggcaattggagcttcacgccgaccacgccgctgggtgcgggttcg
cacagcttcaccgtcacggccacggatgcggcggggaatgagagcgcggcttcagcggcc
tatgccttgaccgtcgataccgtcgcctccattccgacgatcaccggcatgaccgacaat
gcgggttcggtctttggcggcgtgatctcgggcggaacgactgacgacaccacgcccact
ctctccggaaccggcgcggaggcgaacgcaagcatctcgatctacgacggcaatatgctg
ctgggtacggcgacggcggatgcttcgggcaattggagcttcacgccgactacgccgctg
ggcgagggcttgcacagcttcaccgccacggcgaccgatgcggcgggcaatgtcagcctc
gcttcggcggcctatgcggtcacgatagacctgaccttgccccccgtgccgacgatcacc
ggggccagcgacaatgccggttcgatcctaggcggcgtgatttccggtgggtcgaccgac
gacacgacgccgaccctttccggaaccggtgcggaagcgaacgggaccgtttcggtctat
gacggcagcaccctgctgggcacggcgacggcagacgtttcgggcaactggaatttcacg
cccaccgctccgctgggcgaggggccgcacagcttcaccgccgttggcgtcgacgcagca
ggcaatgccagcattgcctcggcgccttacgcgctgacgatagacctcaccgtcccggcc
gcgccgacgattaccggcgtcagcgacaatgtaggctcggtgctgggggcggtggctctg
ggaggggcgacggacgacacgacgccgaccatttcgggaacaggcgcggaggcgaacgcc
aacgtttccgtctatgatggcggcacgctgctgggcaccgcaacggcggatggatcgggc
aactggaatttcacgccgactgcgcccttgggcaatggaccgcacagcttcaccgccgtc
gtgacggatgccgtgggcaatgcgggcctggcgtcggcgccctatgccatagccatcgat
accgtcgccccgaccgccacggtcgcgatcacggccctgcgcgacgacacgcaggtggtg
ggcgactgggccaccgacgatacgtccccgaccatcacgggcacgctgagcgcaccgctg
gccggcggggagcgggtcgaggtcagcctggatggcggcgccacctggacgcaggcggcg
accagcggcaccagctggtcctacggtcccggcacgctcggcgccggcggccatgtggtg
gacgtgcgcgtcgtggatgcggtcggtaatgtgggctccacggccgcccagccgatcacc
atcacgaacgtcaacgacgcgcccatcgtcctggcatcggacagcagcctgctggggctt
gtcagtgcggaagccctgggcctgctcgacatcggcagccaggccttcgtggcgatcgat
ccggagaacagcctgcaaagcgtcgtgctggactttacgcccctgctgaccgtcggcacg
caggtcttcaccgtgtcgcaggatctggcgaccgaactcggccttgcggtcaacgtcaac
aaccagttcgtgaccgtgctggggacgcccgtctccaccatctcctcgacgatgacgata
acggcgctggatggcgggccgatcgacaatatggccatcaacgaattgctgagggcggtg
catttcaattcaccgcttggtctcaacgtgaacctgctgtcaggcatcagcatcacggcg
accgatacggccggcgcgtcgcggacggacaatgcggccagtctgctcgacgccaatctg
ctcaacaccctgcttggcggcagcagcgatccgaccattttggagggcacggccggcgtc
aacatattgaccggcaccgctgccaatgagcatctctacggctatggcggcgccgatatt
ctccagggcggcggcggcaacgacatattgcgaggtggggccggcgccgacacattggac
ggcggcaccgggaacgacatattgctgttcgacgcggccgatacgctgatcgacggcggg
gcgggcgctgatgcgctgctcgtccgcggcgacagcagcgtgtcgctgaacctcgatgcg
gcgaccaatatccgcaatatggaacggatcgacctgggcgcgggcgacaccggacacagc
ctcaccttgacggaggccggcatcatccaggcgacggatgcgaaccggcaactcatcatc
acgggcgagaataacgacagcgtgaccatgaccggtgcggtccatgtcggccaggcgctg
gtcgataatcacgcctatgagcaatatagtctgggaaccacgaccgtgctcatcgaagat
cccgtgctggtggtggtttga
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