Sphingobium sp. YBL2: TZ53_16310
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Entry
TZ53_16310 CDS
T03855
Name
(GenBank) DNA recombination protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
syb
Sphingobium sp. YBL2
Pathway
syb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
syb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
TZ53_16310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
syb03400
]
TZ53_16310
DNA repair and recombination proteins [BR:
syb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
TZ53_16310
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
TZ53_16310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
Motif
Other DBs
NCBI-ProteinID:
AJR25057
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Position
3530645..3531379
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AA seq
244 aa
AA seq
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MATLITPALVCALRPHGEHGAIARLLTPGHGLLAGYVRGGRSRQLRPVLLPGNTVKAEFR
ARTEEQLAGLTVELEHSRAPLLAEPLPAAAIDWVCALTAVALPEGTPYPALHQALDGVLG
AVEAAPAARGWAVALIRYELLLLAELGFGLDLSRCAATGGNEDLAYVSPRSAAAVSRAGA
VGYEDRLLPLPAFLLEGGAGDWPALLDGLRLTGFFLERSVLTDWRVDVLAARERLVDRLK
RAVA
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgctgatcaccccggccctggtctgcgcgttgcggccccatggcgaacatggg
gcgatcgcgcgtcttctgacgcccggccatggcctgctggccggctatgtgcgggggggg
cgttcgcgccagttgcgccccgtcctgttgccgggcaataccgtcaaggccgaattccgc
gcccggacggaggagcaactggccgggctgacggtcgaactggagcacagccgcgccccg
cttctggcggagccgttgcccgcggccgcgatcgattgggtctgcgcgctcaccgccgtg
gctctgccggaagggacgccctatcccgcgctccatcaggcgctggacggcgtgctgggc
gccgtggaggcggcgccggctgcgcggggctgggcggtggcgctcatccgctatgaattg
ctgttgctggcggaattgggctttgggctggaccttagccgttgcgcggcgaccggcggg
aatgaggatctggcctatgtcagccctcgcagcgcggcggcggtcagccgggcgggggcc
gtcggctatgaggaccggctgttgcccttgcccgctttcctgctggagggcggggcaggg
gactggcccgccttattggacgggctgcggctgacgggcttctttctcgaacggtccgtc
cttaccgactggcgcgtcgacgtcctcgcggcgcgggagcgcctggtggacaggcttaaa
agagcggttgcctga
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