Sphingobium sp. YBL2: TZ53_16475
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Entry
TZ53_16475 CDS
T03855
Name
(GenBank) polynucleotide adenylyltransferase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
syb
Sphingobium sp. YBL2
Pathway
syb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
syb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TZ53_16475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
syb03019
]
TZ53_16475
Enzymes [BR:
syb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
TZ53_16475
Messenger RNA biogenesis [BR:
syb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
TZ53_16475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
AJR25084
UniProt:
A0A0C5X7D9
LinkDB
All DBs
Position
complement(3579335..3580546)
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AA seq
403 aa
AA seq
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MTSLLPDADWRHRPGLDALLRALGAEQGLARFVGGAVRDGLLGLPVNDLDIATVLEPQSV
IDRLRTAGIKAVPTGIDHGTITAVINGWPVEITTLRRDVSTDGRRATIAYTDDWREDAAR
RDFTINALYADPLTHAITDFFGGVADLRAHRVRFIGEASARIAEDHLRILRYFRFLARFG
HDEPDVEAYAACRDAANSLMALSRERIADELLKLLALPGPLASLRLMVDGGILLPVLPEV
DHDGLARLSMLVEREAASGIAPAALRRLAALLPPDPRAADQVGARLKLSNKARKRLTAAL
EGAATGAPPRALAFRIGVEGAIDRILIDPSAPLDGLKMLADWVPPRLPLGGGALIARGLQ
PGPDVAKALAEVQDIWVAEDFPDAARVSEIADQTVSKFQRARQ
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgaccagcctgctgcctgacgccgactggcgccatcgccccggcctggacgcgctgctg
agggcgctcggcgcggaacagggcctcgcccgcttcgtcggcggcgccgttcgcgacggc
cttctgggcctgccggtcaacgacctggacatcgccaccgtgctggagccgcagtccgtc
atcgaccgcctcaggaccgccgggataaaggccgtccccaccggcatcgaccatggcacg
atcacggcggtgatcaacggctggccggtggagatcacgaccctccgccgcgacgtcagc
acggacggccgccgcgccaccatcgcctataccgacgactggcgcgaagacgccgcccgg
cgcgatttcacgatcaacgcgctctatgccgaccccctcacccacgccatcacggacttc
ttcggcggcgtcgccgatctccgcgcgcatcgcgtccgcttcatcggagaggcaagcgcc
cgcatcgcggaggatcatctccgcatcctgcgctatttccgtttcctcgcgcgcttcggc
catgacgaaccggatgtggaggcctatgccgcctgccgcgacgccgccaacagcctgatg
gccctttcgcgcgaacgcattgcggacgaactgctcaaactgctcgccctgcccgggccg
ctcgcctcgctccggctcatggtcgacggcggcatattgctgcccgtcctgccggaggtc
gaccatgacggactggcccgcctgtccatgctggtcgagcgggaggccgcctccggcatc
gcccctgcggccctgcgccgcctggcggccctgcttccaccggacccgcgcgccgccgat
caggtgggcgcccggctcaaattgtccaacaaggcccgcaagcgcctgaccgccgcgctg
gaaggcgccgccaccggcgcgcccccccgcgccctcgccttccggatcggcgtggaaggg
gccatcgaccgtatcctgatcgatccctcggctccgctcgacggcctgaagatgctcgcg
gactgggtcccgccgcgcctgccgctgggcggcggcgcgctgatcgcgcggggccttcag
cccggcccggacgtggcgaaggcgctggccgaggttcaggacatctgggtggcggaggat
tttcccgacgcagcccgcgtctcggaaatcgcggatcagaccgtttcgaaattccaacgc
gcccgccaatag
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