Sphingobium sp. YBL2: TZ53_16725
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Entry
TZ53_16725 CDS
T03855
Name
(GenBank) DNA primase
KO
K02316
DNA primase [EC:
2.7.7.101
]
Organism
syb
Sphingobium sp. YBL2
Pathway
syb03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
syb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TZ53_16725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
syb03032
]
TZ53_16725
Enzymes [BR:
syb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.101 DNA primase DnaG
TZ53_16725
DNA replication proteins [BR:
syb03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
TZ53_16725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Zn_ribbon_DnaG
DNAG_N
Toprim_4
Toprim_2
Toprim
Toprim_3
DnaB_bind
Motif
Other DBs
NCBI-ProteinID:
AJR25125
LinkDB
All DBs
Position
complement(3630649..3632550)
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AA seq
633 aa
AA seq
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MSLSPAFLDELRARTSLSTLIGRTVKVQKAGREYKACCPFHNEKTPSFTINDEKGFYHCF
GCGAHGDAIRWMTDHRGLPFMEAVKELAQAAGMDVPAPDPRAAKRAEQARGLHDVMAAAQ
GFFEEQLGGIEGAEARAYLQQRGIAAGTARTFGFGFSPDGRGRLKTALKEFGEPLLIEAG
LLIDPDGAEPDGGNARKRDSYDRFRGRLMLPIRDIRGRVIAFGGRILGAGEPKYLNSPDT
PLFDKGRTLYNIDRASPASRQTGRIIVVEGYMDVIALAQAGFEESVAPLGTALTEHQIER
LWKMADVPILCFDGDSAGQKAAIRAATRALPLLRPGMSLAFATLPAGQDPDDLIRAEGPA
AMEAVLGAAEPLVERLWKYEQAAAPLDTPEQRAALKQRLSAITDAIAHPDVRAHYVHAFR
ERYDALFFARAAFQPRHQRGGGSARSGWQRDRRGNWKPPLPPAGSEARAIGASGMEQRLL
RAVLASLLRHPDQIALHREMLIGLRIADTVLAELLNAMIAASFSKETVETGGLLTILGQG
EVYNMAKGMLRADTFTFTPHGSKADSDRVRRDLDEAIRVMAQGPELEAALAEATRRARDD
LNEDSFAEQQRVRKLKLDHDRRLAELAQSEDII
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgtcccccgccttcctcgacgaattgcgcgcgcgcacctccctttccaccctg
atcgggcggacggtgaaggtgcagaaggcaggccgcgaatataaggcctgctgccccttc
cataatgagaagacgcccagcttcacgataaacgacgaaaagggcttctatcactgcttc
ggctgcggcgcgcatggcgacgcaatccggtggatgaccgatcatcgtggccttcccttc
atggaagcggtgaaggaactggcgcaggcggcgggcatggacgtccccgcgcccgatccg
cgcgcggcgaaacgggcggaacaggccaggggcctgcatgacgtcatggccgccgcgcag
ggctttttcgaggagcagcttggcggaattgagggcgcggaggcgagagcctatctccag
cagcgcggcatcgccgcgggaacggccaggaccttcggcttcggcttctcgcctgacggg
cgggggcggctcaagacggcgctcaaggaatttggcgaaccgctgctgatcgaggcggga
ttgctcatcgacccggatggcgccgagccggatggcggaaatgccagaaagcgcgacagc
tatgatcgcttccggggccggctgatgttgccgatccgggacataagaggccgggtgatc
gcttttggcgggcgcatattgggcgcgggcgagcccaaatatctgaactcccccgacacg
ccgctcttcgacaaggggcggacgctctacaatatcgaccgggcctcccccgccagccgg
cagacgggccggatcatcgtcgtggagggctatatggacgtgatcgccctcgcccaggcc
ggctttgaagaatcggtggcgccactgggcacggcgcttacggaacatcagatcgagcgc
ctgtggaagatggccgatgtgccgatcctctgtttcgacggcgattcggcggggcagaag
gccgcgatccgggcagcgacccgggccctgcccctgctccgaccgggtatgagcctggcc
tttgcgactctgccggccgggcaggacccggacgacctcatccgcgcggaggggcctgcg
gcgatggaagcggtgctgggcgccgccgaaccgctggtcgagcgcctttggaaatatgaa
caggctgccgcgccgctggatacgccggagcagcgcgccgcgctcaagcagcgcctgtcc
gcgatcaccgacgccatcgcccatcccgacgtgcgggcgcattatgtccacgcctttcgg
gaacgctatgacgcgctgttcttcgcgcgggcggccttccagccccgtcatcagcgcggc
gggggcagcgcccgctccggctggcagcgcgaccggcgcggcaattggaagcccccactg
ccccccgcgggaagcgaggcaagggcgatcggcgcaagcggcatggagcagcggcttttg
cgcgccgtcctcgccagcctgcttcggcatcccgatcagattgcgctgcatcgcgagatg
cttatcgggcttcgcatcgccgacaccgtgctggcggaactgctgaacgcgatgatcgcg
gcctcgttcagcaaagaaacagttgaaaccggtggcctccttaccatattggggcaaggt
gaagtgtataatatggcgaagggaatgcttcgggccgacacgttcacattcaccccccat
ggaagcaaggccgactcggatcgcgtgcggcgcgatctggacgaggccattcgggtgatg
gcgcagggaccggagctggaggcggcgttggctgaagccacccggcgggcgagagacgac
ctcaacgaggacagctttgccgaacagcaaagggtccgcaagttgaagctggatcatgat
cgccgcctggcggaactggcgcagtccgaagatattatatga
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