Sphingobium sp. YBL2: TZ53_16750
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Entry
TZ53_16750 CDS
T03855
Name
(GenBank) carbamoyl phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
syb
Sphingobium sp. YBL2
Pathway
syb00220
Arginine biosynthesis
syb00240
Pyrimidine metabolism
syb00250
Alanine, aspartate and glutamate metabolism
syb01100
Metabolic pathways
syb01110
Biosynthesis of secondary metabolites
syb01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
syb00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
TZ53_16750
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
TZ53_16750
00220 Arginine biosynthesis
TZ53_16750
Enzymes [BR:
syb01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
TZ53_16750
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Gene cluster
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Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
MGS
Dala_Dala_lig_C
ATP-grasp
ATPgrasp_Ter
ATP-grasp_4
ATP-grasp_3
CoA_binding_2
RimK
ATP-grasp_5
Motif
Other DBs
NCBI-ProteinID:
AJR25129
UniProt:
A0A0C5X7I1
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Position
3635496..3638831
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AA seq
1111 aa
AA seq
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MPKRTDISSILIIGAGPIIIGQACEFDYSGTQAVKALKEEGYRIILVNSNPATIMTDPEF
ADATYVEPITPEIVAKIIEKERPDAVLPTMGGQTALNTALALFNDGTLEKFGVKMIGADA
AAIDKAEDRLKFRDAMDKIGLESARSRIAHTMEEALEALEFTGLPSIIRPSFTLGGTGGG
VAYNKDEFKQIVAAGLDASPTTEVLIEESLLGWKEYEMEVVRDRNDNAIIICSIENVDPM
GVHTGDSITVAPALTLTDKEYQIMRNASIAVLREIGVETGGSNVQFAVNPKDGRLIVIEM
NPRVSRSSALASKATGFPIAKVAAKLAVGYTLDEIENDITGATPASFEPTIDYVVTKIPR
FAFEKFKGSEPLLGTAMKSVGEVMAIGRNIHESMQKALRGLETGLCGFNEVDHLVGAPKD
DIIAALAQPTPDRLLVAAQALREGLTVAEIHNIAKFDPWFLERIKEIIDAEAEILNNGLP
QDADGMRRLKSMGFSDKRLAYLALKSANLRGMERGIARGSGLIHEAVKAMTGGVTEDEVR
ALRHRLGVRPVFKRIDTCAAEFEAKTPYMYSTYEAPIFGDAENEAQPSDRKKVVILGGGP
NRIGQGIEFDYCCVHACFALAEAGYETIMVNCNPETVSTDYDTSDRLYFEPLTAEDVLEI
LSVEMSNGTLAGVIVQFGGQTPLKLAQALENAGVPILGTSPDAIDLAEDRERFAALIDRL
KLKQPANGIARSREEAIAVANRIGYPVLMRPSYVLGGRAMEIVDGQAQLEEYIATAVQVS
GDSPVLIDQYLRDAVEVDVDALCDGDDVVVAGVLQHIEEAGVHSGDSACSLPPYSLSDDI
IAEIERQADVLARALSVRGLMNIQFAVKDGVVYLIEVNPRASRTVPFVAKAIGTPIAKIA
SRVMAGEKLKDLPKIDRNAIDHIAVKEAVFPFARFPGVDPVLSPEMKSTGEVMGIDSDFA
TAFAKAQLGAGTILPKGGTVFVSVKDSDKPVILPAVQKMAALGFAIIATGGTARYLEEQG
IAVQPVNKVAEGRPHIVDRITDGDVDLIFNTTEGWQSLKDSKAIRTSALRAKVASFTTAA
ASVAAANAIEALRGHALEVRSLQSYYPVSQA
NT seq
3336 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaacgcaccgacatctcctccatcctcatcatcggcgctggtccgatcatcatc
ggccaggcttgcgagttcgactattcgggcacgcaggcggtgaaggcgctcaaggaagag
ggctatcgcatcatcctggtgaattccaacccggctaccatcatgaccgatccggaattc
gccgacgcgacctatgtcgagccgatcacgcccgaaatcgtggcgaagattatcgagaag
gaacgccccgacgcggtgttgccgaccatgggcgggcagacggcgctcaacacggcgctc
gctctcttcaacgacggcacgctagagaagttcggcgtcaagatgatcggcgcggatgcg
gcagccatcgacaaggcggaggaccgcctgaaattccgcgacgcgatggacaagatcggg
ctggaatccgcccgctcgcgcatcgcacatactatggaagaagcgctggaagcccttgaa
ttcaccgggcttccttcgattatccgtcccagcttcacgctcggcggcactggcggcggc
gttgcctataacaaggacgagttcaagcagatcgtggccgcaggcctcgacgcttcgccc
accaccgaggtgctgatcgaggaatcgctgctcggctggaaggaatatgagatggaggtc
gtccgggaccggaacgacaatgccatcatcatctgctcgatcgagaatgtcgatccgatg
ggggtccataccggcgattccatcaccgtcgcgcccgcgctgacgctgaccgacaaggaa
tatcagatcatgcgcaacgcgagcatcgcggtgctgcgtgaaatcggcgtggaaacaggc
ggttcgaacgtgcagttcgcagtcaatccgaaggatggccgcctgatcgtcatcgaaatg
aacccgcgcgtttcccgctcgtccgcgctggcttctaaggcgacgggcttccccatcgcg
aaggtcgcggcgaagctcgccgtcggctacacgctggatgagatcgagaacgacatcacc
ggcgccaccccggcgtcgttcgagccgaccatcgactatgtcgtgaccaagattccgcgc
ttcgccttcgagaagttcaaggggtccgaaccgctgctcggcaccgcgatgaagtcggtg
ggcgaggtgatggcgatcggccgcaacatccatgaatcgatgcagaaggcgctgcggggc
ctggaaaccgggctttgcggcttcaatgaggtcgaccatctcgtcggcgcgcccaaggac
gacatcatcgccgcgctggcccagccgacgccggatcgcctgctggtcgccgcgcaggcc
ctgcgcgagggcctcaccgtcgctgaaatccacaatatcgcgaagttcgacccctggttc
ctggagcggatcaaggagatcatcgacgccgaagcggaaattctgaacaacggcctgccg
caggatgcggacggcatgcgccggctgaagtcgatgggcttttccgacaagcgccttgcc
tatcttgcgctcaaatcggccaatctgcgcggcatggaacggggcatcgcgcggggttcc
ggcctgatccacgaagcggtcaaggccatgaccggcggcgtcaccgaggatgaggtccgc
gcgctgcgccacaggctgggcgtgcgccccgtgttcaagcgcatcgacacctgcgccgcc
gagttcgaggcgaagacgccctatatgtactcgacctacgaagcgccgatctttggcgat
gcggagaatgaggcgcagcccagcgacaggaagaaggtcgtgatcctgggcggcggtccc
aaccgcatcgggcagggcatcgagttcgactattgctgcgtccatgcctgcttcgcgctg
gcggaggcgggttatgagacgatcatggtcaactgcaacccggaaacggtgtcgacagac
tatgacacgtcggaccgtctctatttcgagccgctgacggcggaggacgtgctggaaatc
ctgagcgtcgagatgtcgaacggaacgctggccggcgtgatcgtccagttcggcgggcag
acgccgctcaagctggcgcaggcgctggaaaatgcgggcgtgccgatcctgggcacgtcg
cccgacgccatcgacctggcggaggaccgcgagcggttcgccgcgctgatcgacaggctg
aaactgaagcagcccgccaacggcatcgcgcgcagccgcgaggaggcgatcgccgtcgcc
aaccgcatcggctatccggtgctgatgcgcccctcctatgtccttggcggccgcgccatg
gagatcgtcgatggtcaggcccagctggaggaatatatcgccaccgccgttcaggtgtcg
ggcgactccccggtgctgatcgaccagtatctgcgcgacgcggtcgaggtggatgtggac
gcgctctgcgacggcgacgatgtggtggtcgccggcgtgctccagcatatcgaggaggcg
ggcgtccattccggcgactccgcctgctcgctgccgccctacagcctgtcggacgacatc
atcgcggagatcgagcgtcaggccgatgtcctcgcccgcgcgctgtcggtccgcggcctg
atgaacatccagttcgcggtcaaggacggcgtcgtctatctgatcgaggtcaatccccgc
gccagccggaccgtgcccttcgtcgccaaggccatcggcacgccgatcgccaagatcgcc
agccgcgtcatggcgggcgagaagctcaaggacctgccgaagatcgaccggaacgccatc
gaccatatcgcggtcaaggaagccgtcttccccttcgcccgcttccccggcgtcgatccg
gtgctctcgccggaaatgaagagcaccggcgaagtcatgggcatcgacagcgatttcgcc
acggccttcgccaaggcgcagctgggcgcggggaccatcctgcccaagggcggcacggtg
ttcgtgtcggtcaaggacagcgacaagccggtgatcctgcccgccgtgcagaagatggcg
gcgctgggcttcgccatcatcgccacgggcggcacggcccgctatctggaggagcagggc
atcgccgtccagccggtcaacaaggtggccgaagggcgtccgcatatcgtcgacaggatc
accgacggggacgtcgacctaatcttcaacacgacggagggctggcagtcgctcaaggac
agcaaggcgatccgcaccagcgcgctgcgcgccaaggtcgccagcttcaccacggcggcg
gccagcgtcgcggcggcgaatgcgatcgaggctcttcgggggcatgcccttgaagtgcgt
tcgctccagtcctattatcctgtgtcgcaagcctga
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