Sphingobium sp. YBL2: TZ53_17200
Help
Entry
TZ53_17200 CDS
T03855
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
syb
Sphingobium sp. YBL2
Pathway
syb00260
Glycine, serine and threonine metabolism
syb00460
Cyanoamino acid metabolism
syb00630
Glyoxylate and dicarboxylate metabolism
syb00670
One carbon pool by folate
syb00680
Methane metabolism
syb01100
Metabolic pathways
syb01110
Biosynthesis of secondary metabolites
syb01120
Microbial metabolism in diverse environments
syb01200
Carbon metabolism
syb01230
Biosynthesis of amino acids
syb01240
Biosynthesis of cofactors
syb04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
syb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
TZ53_17200 (glyA)
09102 Energy metabolism
00680 Methane metabolism
TZ53_17200 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
TZ53_17200 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
TZ53_17200 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
TZ53_17200 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
TZ53_17200 (glyA)
Enzymes [BR:
syb01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
TZ53_17200 (glyA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
Aminotran_1_2
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
AJR25208
UniProt:
A0A0C5XW22
LinkDB
All DBs
Position
complement(3734620..3735939)
Genome browser
AA seq
439 aa
AA seq
DB search
MSTATLTQPDLSDIRSEGYFTRSLADADPAVFAGVTRELKREQNQIELIASENIVSKAVL
EAQGSVFTNKYAEGYPGKRYYQGCAPSDEVEQLAIDRAKEIFNCGFVNVQPHSGAQANGA
VMLALTKPGDTIMGLSLDAGGHLTHGAKPALSGKWYNAVQYGVREDTHLIDYDALEAQAI
EAKPTLIIAGGSAYPRHLDFARFRAIADKVGALLMVDMAHFAGLVAGGAHPTPFGHAHVV
TTTTHKTLRGPRGGMILTDDEAIAKKINSAVFPGLQGGPLMHVIAAKAVAFGEALRPEFR
TYAQAIVTNAKALASKLEQRGLAVVSGGTDTHLALIDLRPYGISGKDADEALERSFITCN
KNGVPGDPLPPTKTSGIRVGSPAGTTRGFGVAEFEAIGDMIADVLEGLRDHGEHGDAAVE
ANVRDRVSALCARFPIYEG
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccgctaccctcacccagcccgacctgtcggacatccgctccgaaggctatttc
acgcgcagcctggccgatgccgatccggcggtgttcgcgggcgtcaccagggaattgaag
cgcgagcagaaccagatcgagctgatcgcttcggaaaatatcgtatccaaggcggtgctg
gaggcgcagggttcggtcttcaccaacaaatatgccgaaggctatcccggcaagcgctat
tatcagggctgcgccccgtcggacgaggtcgagcagctggccatcgaccgcgcgaaggaa
atcttcaactgcggcttcgtcaatgtgcagccccattcgggcgcgcaggcgaacggcgcg
gtgatgctggcgctgaccaagccgggcgacaccatcatgggcctgtcgctcgacgccggc
ggtcacctgacacatggcgcgaagcccgcgctgtcgggcaaatggtataatgccgtgcaa
tatggcgtgcgcgaggatacgcacctcatcgattatgacgcgctggaggcgcaggcgatc
gaagcaaagcccacgctgatcatcgcgggcggttcggcctatccccgccacctcgacttc
gcccgcttccgcgcgatcgcggacaaggtcggcgcgctgctgatggtggacatggcgcat
tttgccgggctggtggctggcggggcgcatccgacgccctttggccatgcccatgtcgtg
accaccaccacgcacaagaccctgcgcggtccgcgtggcggcatgatcctgaccgatgac
gaggccattgcgaagaagatcaattcggcggtgttccccggccttcagggcgggccgctg
atgcatgtgatcgcggcgaaggcggttgccttcggcgaggcgctgcgtcctgaattcagg
acttatgcgcaggcgatcgtcaccaatgcaaaggcgctggcttcgaagctggagcagcgc
ggcctcgcggtggtttccggcggcaccgacacgcatctcgccctgatcgacctgcgcccc
tacggcatttcgggcaaggatgcggacgaggcgctggaacgcagcttcatcacctgcaac
aagaatggcgtgccgggcgatccgctgccgccgaccaagaccagcggtattcgggttggt
tcccctgcgggaacgacgcgcgggttcggcgttgcggagttcgaggccattggcgacatg
atcgcggatgttctggaggggctgcgcgatcatggcgagcatggcgacgcagccgtggaa
gccaatgtgcgcgaccgcgtctccgccctctgcgcccgtttcccgatctacgaagggtaa
DBGET
integrated database retrieval system