Sphingobium sp. YBL2: TZ53_17455
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Entry
TZ53_17455 CDS
T03855
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
syb
Sphingobium sp. YBL2
Brite
KEGG Orthology (KO) [BR:
syb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
syb03032
]
TZ53_17455
03400 DNA repair and recombination proteins [BR:
syb03400
]
TZ53_17455
Enzymes [BR:
syb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
TZ53_17455
DNA replication proteins [BR:
syb03032
]
Prokaryotic type
DNA Topoisomerases
TZ53_17455
DNA repair and recombination proteins [BR:
syb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
TZ53_17455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Beta-prop_ELP1_1st
DUF2835
Motif
Other DBs
NCBI-ProteinID:
AJR25250
UniProt:
A0A0C5XL52
LinkDB
All DBs
Position
complement(3783805..3786540)
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AA seq
911 aa
AA seq
DB search
MTDETALADPSDISPISIVEEMKASYLDYAMSVIVARALPDVRDGLKPVHRRILFSAHES
GFTYNKPYRKSARIVGDVIGKYHPHGDTAIYDALARMTQDWSMRVPLIDGQGNFGSMDPD
PPAAMRYTEARLAKVTNALLDDLDKDTVDFQPNYDASESEPQVLPARFPNLLVNGAGGIA
VGMATNIPPHNLGEVIRACLAYIDNTGITVDELIQIVPGPDFPTAPLILGQSGARSAYHT
GRGSIMMRARHEIEEGRGDRRSIVLTAIPYQVGKNGLVEKIAEAAKDKRIEGISDIRDES
SREGVRIVMDLKRDATPEVVLNQLWRNTPAQSSFPANMLAIRGGRPELLNIRDIIEAFVR
FREEVITRRTKYELNKARDRAHILLGLVIAVTNLDEVVRIIRGSASPAEARETLLARDWP
VAEIAPYLRLVEAIETEVSGDSYRLSDTQVRAILDLRLHRLTALGRDEIGNELAELAAAI
AEYLAILGDRVKLYAVMREEFEAIERDFATPRLSEITAAADGIDDEDLIEREEMVVTVTV
QGYIKRTPLESFRAQARGGKGRSGMATKDEDAITELFVTSTHTPVLFFSTAGKVYRLKVW
RLPEGGPATRGRPMVNLLPLGPGETIQTVLPLPEDEESWKDLHVMFATANGTVRRNSMDA
FANIPSNGKIAMRFDDESSDRLIGVALLTEEDDVLLATRQGKAIRFQATDVREFQSRTST
GVRGMTLKKDDEVISLSILHRAGIKDQEERDDYLRFAPWKAEKEGSPQMSAERFAELAAK
EQFILTVCANGYGKLSSAYDYRRTGRGGQGITNIDNIGRNGPVVASFPARHGDHLMLVTD
QAKLIRMGLESLRVIGRSSAGVRLFNVSDDEHVVSAAKIEESDEETEVSTPAGLEVSPDV
SPEADPDLAEE
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
ttgaccgacgagactgccctcgccgacccttcggacatcagccccatctccatcgtggag
gagatgaaggcgagctatctcgactatgccatgtcggtgatcgtcgcccgcgccctgccg
gacgtgcgcgacggcctgaagccggtgcatcgccgcattctcttttccgcccatgaatcg
ggcttcacctacaacaagccctatcgcaagtcggcccgcatcgtcggcgacgtgatcggt
aaatatcacccccatggcgacacggcgatctacgacgcattggcgcgcatgacccaggac
tggtcgatgcgcgtgccgctgatcgacgggcagggaaacttcggctccatggaccccgac
ccgccggcggccatgcgctataccgaagcgcggctcgccaaggtgacgaacgccctgctg
gacgatctcgacaaggacaccgtcgatttccagccgaactacgacgcttcggaaagcgag
ccgcaggtcctgcccgcgcgcttccccaacctgctggtcaacggcgcgggcggcatcgcg
gtcggcatggcgaccaacatcccgccgcataaccttggcgaagtgatccgcgcctgcctg
gcctatatcgacaacaccggcatcaccgtggacgaactgatccagatcgtccccggcccc
gacttcccgaccgcgccgctcatcctcggccagtccggcgcccgcagcgcctatcatacc
ggccgcggctcgatcatgatgcgcgcccggcacgaaatcgaggaagggcgcggcgaccgc
cgttccatcgtccttaccgccattccctatcaggtcggcaagaacggcctggtcgaaaag
atcgccgaagccgccaaggacaagcggatcgaggggatcagcgacattcgcgacgaatcg
agccgcgaaggcgtgcggatcgtcatggacctgaagcgcgacgccacgcccgaagtcgtg
ctgaaccagctctggcgcaacacccccgcccagtcgagctttccggccaacatgctcgcc
attcgcggcggccgcccggaactgctcaacatccgcgacatcatagaggcgtttgtccgc
ttccgcgaagaggtcatcacccgccgcaccaaatatgaactcaacaaggcccgtgaccgc
gcgcatatcttgctgggcctcgtcatcgcggtcacgaacctcgacgaagtcgtccgcatc
atccggggctcggccagccctgccgaagcccgcgaaaccctgctcgctcgcgactggccg
gtggcggagatcgcgccctatctgcggctggtcgaagcgatcgaaacggaagtcagcggc
gacagctaccgcctgtcggacacgcaggtccgcgcgatccttgacctgcgcctgcatcgc
ctgaccgcgctcggccgggatgagatcggcaatgaactggcggaactcgccgccgccatt
gccgaatatctcgccattctcggcgaccgcgtgaagctctacgccgtgatgcgcgaggag
ttcgaggcgatcgagcgcgacttcgccaccccgcgcctgtcggagatcaccgccgccgcc
gacggcatagacgacgaagacctgatcgagcgggaggaaatggtcgtcaccgtcaccgtg
cagggctatatcaagcgcaccccgctggagagtttccgcgcccaggcgcgcggcggcaag
ggccgttccggcatggcgaccaaggatgaggacgcgatcaccgaattgttcgtgacctcc
acccatacgccggtcctgttcttctcgacggcgggcaaggtctatcgcctcaaggtctgg
cgcctgcccgaaggcggcccggcgacgcgcgggcggccgatggtgaacctgctgccgctc
ggccccggcgagacgatccagaccgtgctgccgctgcccgaggatgaggagagctggaag
gatctgcacgtcatgttcgccaccgcgaacggtacggtgcgccgcaacagcatggacgcc
ttcgccaacatcccgtcgaatggcaagatcgcgatgcgcttcgacgatgaaagcagcgac
cgcctgatcggcgtggcgctgctcaccgaagaggatgacgtgctgctcgccacccgccag
ggcaaggcgatccgtttccaggcgacggacgtgcgcgaattccagagccgcacctccacc
ggcgtgcgcggcatgacgctgaagaaggacgatgaggtcatctcgctctccatccttcat
cgcgccggcatcaaggatcaggaagaacgcgacgactatctccgcttcgccccctggaag
gcggagaaggaaggctcgccgcagatgagcgcggaacgctttgccgaactggcggccaag
gaacagttcatcctcaccgtctgcgcgaacggctatggcaagctgtcctcggcctatgac
tatcgccgcaccggacgcggtgggcagggcatcaccaatatcgacaatatcggccgcaac
ggccctgtcgtcgccagcttcccggcgcggcacggcgaccatctgatgctcgtcaccgac
caggccaagctgatccgcatgggccttgaatccctccgcgtcatcggtcgcagctcggcg
ggcgtgcgcctcttcaacgtgtccgacgacgagcatgtcgtcagcgcggcgaagatcgag
gaaagcgacgaggagacggaggtgagcacccccgccggcctggaagtcagcccggacgtc
agccccgaagccgatccggacctggccgaagagtga
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