KEGG   Sphingobium sp. YBL2: TZ53_17920
Entry
TZ53_17920        CDS       T03855                                 
Name
(GenBank) integration host factor
  KO
K03530  DNA-binding protein HU-beta
Organism
syb  Sphingobium sp. YBL2
Brite
KEGG Orthology (KO) [BR:syb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:syb03032]
    TZ53_17920
   03036 Chromosome and associated proteins [BR:syb03036]
    TZ53_17920
   03400 DNA repair and recombination proteins [BR:syb03400]
    TZ53_17920
DNA replication proteins [BR:syb03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    TZ53_17920
Chromosome and associated proteins [BR:syb03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    TZ53_17920
DNA repair and recombination proteins [BR:syb03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      TZ53_17920
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 HU-CCDC81_euk_2 PqqD
Other DBs
NCBI-ProteinID: AJR25320
UniProt: A0A0C5XLD7
LinkDB
Position
complement(3889897..3890172)
AA seq 91 aa
MNNSDLAEALAAEHDVTKADARKLVDAVFANIAGAAAKGEEISLNGFGKFKVKDQPAREG
RNPSTGATIQIAASKKLAFTPAKAVKDQLNG
NT seq 276 nt   +upstreamnt  +downstreamnt
atgaacaatagcgatctggctgaagcactggccgccgagcatgacgtcaccaaggccgat
gcccgcaagctggtcgacgcggtcttcgcgaatatcgccggcgcagcagcgaagggcgaa
gagatttcactgaacggtttcggcaagttcaaagtcaaggatcagcccgcccgcgaaggc
cgcaatccctcgaccggcgcaacgatccagattgcggcgtcgaagaagcttgccttcacg
cccgccaaggcggtcaaggatcagttgaacggctga

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