Sphingobium sp. YBL2: TZ53_19190
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Entry
TZ53_19190 CDS
T03855
Name
(GenBank) lytic murein transglycosylase
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
syb
Sphingobium sp. YBL2
Brite
KEGG Orthology (KO) [BR:
syb00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
syb01011
]
TZ53_19190
Enzymes [BR:
syb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
TZ53_19190
Peptidoglycan biosynthesis and degradation proteins [BR:
syb01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
TZ53_19190
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Gene cluster
GFIT
Motif
Pfam:
SLT
Motif
Other DBs
NCBI-ProteinID:
AJR25540
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Position
4168590..4170389
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AA seq
599 aa
AA seq
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MIRATTLSSCLAALAFAATAMPANADTAVTVPAIARELPSSPLQLSEADKGRYSAIYAAL
RDQKWMDAKAMIGALDAQDAFRPVALAELYLARNSPRVELFELLDLINKAPWLDKADQLS
RLAQKRGATILPALPQVQKMVWLGGAPRREYVSAVKTDALAQALVGQIQPFIKNDDPAGA
EALLSTGEAGLTPEGLTEVRQRIAWAYYIESDDANARRMAAKALEGRSGGDWAVQAYWTT
GLAAWRQNDCRAAAPAFGNVATLAGNSDMRAAGAYWAARAYMVCGEPERVEALLKTAARS
EESFYGLLARETLAVPLGGAPAAPRFGATEWQQLKDSPNVRAAVTLSAIGETARADQILR
YQAKIGGTGQYDALIRLAGALSLPETQLWLAHNGPAGKQPGSFARFPAPDWRPDGGWRVD
PALIYAHALQESGFRRDVVSSAGARGLMQVLPSTGSLMGLSASDQLFVPSTNMEYGQRYL
ENLRDMGATGGLLPKVMAAYNAGPMPVERWNSEVKDNGDPLLFIESLPYYETRAYVNIVM
RNYWMYQIQAKGSAESLAGMAQGLWPTFPGTKGTRLVRLAPRKPMASASIAASIAGGSD
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
gtgattcgcgcaaccaccctttcatcatgcctggcagcgctggctttcgccgcgacggcc
atgccggcaaacgccgacacggcggttactgttcccgcgattgccagggaattgccctca
tcgcctctccagctgagcgaggccgacaagggccggtacagcgccatttacgccgccttg
cgggaccagaaatggatggatgcgaaggcgatgatcggcgcgctggacgcacaggacgct
ttccgcccggtcgccctggccgaactctacctcgcaaggaattcccccagggtcgagctg
ttcgaactgctcgacctcatcaacaaggcgccatggctggacaaggccgatcagctttcc
cggctggcgcagaagcgtggcgccacgatcctgcccgccctgccccaggtgcagaagatg
gtctggctgggtggcgcgccccgccgcgaatatgtgtcggcggtgaagaccgatgcgctg
gctcaggcactggtcggtcaaatccagcccttcatcaagaatgacgatccggccggcgcc
gaagccctgctttccaccggtgaggcggggctgacgccggagggcctgaccgaagtgcgg
cagcgcatcgcctgggcctattatatcgaaagcgacgacgccaacgcccggcgcatggcg
gcgaaggcccttgaaggccgcagcggcggcgattgggctgttcaggcctattggaccacc
ggccttgcggcctggcgccagaatgactgccgggccgctgcgcctgctttcggcaatgtc
gcgacgctggccggcaatagcgacatgcgcgcagcaggcgcctattgggcggcgcgcgcc
tatatggtgtgcggagaaccggagcgggtcgaagccctgctgaagaccgctgcgcgctcg
gaagagagcttctacggcctgctcgcccgcgaaacgctggccgtgcccttgggcggcgcg
cctgccgcacctcgcttcggcgctacggaatggcagcagctcaaggacagccctaatgtg
cgggcggccgtcaccctgtcagccattggtgaaacggcacgagcggaccagatcctgcgc
tatcaggcgaagatcggcgggaccggccaatatgatgcgctgatccggctggcgggcgcg
ctgagcctgccggaaacccagctctggctcgctcataacggtcctgcgggcaagcagccg
ggcagtttcgcgcgcttccccgcgcccgattggcggccggatggtggatggcgggtcgac
ccggcgctgatctatgcccatgcgctccaggaatccggtttccgccgggatgtcgtgagc
agcgcaggcgcgcgcggactgatgcaggtgctgcccagcacgggcagcctgatggggctt
tccgcgtccgatcaactgttcgtgccgtcgaccaatatggaatatggccagcgctacctc
gaaaatctgcgcgacatgggcgcgaccggcgggctgctgcccaaggtgatggccgcctat
aatgccgggccgatgcccgtcgagcgttggaacagcgaagtgaaggacaatggcgacccg
ctgctgttcatcgaatccctgccctattacgaaacgcgcgcctatgtgaacatcgtgatg
cgcaactattggatgtatcagatccaggcgaagggcagtgcggaatcgctggccggcatg
gcgcagggactttggccgacctttccgggaacgaagggcacgcgcctggtgcgcctggct
cccaggaagccgatggccagcgcaagcatcgccgccagtattgccggcggttccgactga
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