Sphingobium sp. YBL2: TZ53_19290
Help
Entry
TZ53_19290 CDS
T03855
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
syb
Sphingobium sp. YBL2
Brite
KEGG Orthology (KO) [BR:
syb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
syb03400
]
TZ53_19290
Enzymes [BR:
syb01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
TZ53_19290
DNA repair and recombination proteins [BR:
syb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
TZ53_19290
Prokaryotic type
TZ53_19290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Usp
Motif
Other DBs
NCBI-ProteinID:
AJR26512
LinkDB
All DBs
Position
complement(4193291..4194667)
Genome browser
AA seq
458 aa
AA seq
DB search
MSDPVILWFRQDLRLADQAALAAAVQEGPVIPVYVLDDQAPRQWKMGGASRWWLHHSLKS
LDENLREKGSRLILRQGNCIDQIVQIAEETGARRVHALHHYEPWWRNAEKSLVKRLELCL
HDGALLLPPGAVRTGEGNSYRIYTPFARAVMEHMPPAEPVRAPSRIDAPGRWPKSDSLDR
WGLLPTKPDWARAFSRDWTPGEAGARANVAAFLDQVADYDRARNLPSQEGSSRLSPHLHF
GEVSPAYVWRRVAGAPGDATTFLKELIWRDYAHTQIWAMPAYGSENARPAFDAMPWRDLR
EAGADFKAWKTGRTGYPIVDAGMRQLWTTGWMHNRVRMIAASFLIKHLLIDWRHGARWFW
DTLVDASYANNSVNWQWVAGSGVDANIFSRIMAPLTQSGKFDAADYIRAWVPELAHLNDD
IIHDPEAHDARSSDYPAKCIGHREGRERALAAWRGIRP
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaccccgtaattctctggtttcgtcaggacctgcgccttgccgatcaggccgca
ctggcagccgccgtgcaggaagggccggtgattcccgtctatgtgctggacgatcaggcg
ccgcgccaatggaagatgggcggagcgtcgcgctggtggctgcaccatagcctgaagagc
ctggacgaaaatcttcgggagaagggatcgcgcctgatcctgaggcagggaaactgcatc
gatcagatcgtccagatcgctgaggaaacgggcgcccggcgcgtgcatgccctgcatcat
tacgaaccctggtggcgcaatgcggagaagtcgctcgtcaaaaggctggagctgtgcctg
catgacggcgcattgctgctgccgcccggcgcggtgcggacgggcgaaggaaacagctat
cggatctatacccccttcgcccgcgccgtgatggagcatatgccgccggccgaaccggtt
cgcgcgccttcgcgcatcgatgcgccaggacgttggccgaaaagcgattcgctggaccga
tggggccttttgccgaccaagccggattgggccagggccttttcacgcgactggactcct
ggggaagcgggggcgcgggccaatgtcgccgcctttctcgaccaggtggcggattatgac
agggccaggaacctgccctcgcaggaggggagctctcgcctgtcgccgcacctccatttc
ggggaggtctcccccgcctatgtctggcgccgggttgccggagcgcccggcgatgcgacg
accttcctcaaggaactgatctggcgcgactatgcccatacgcagatatgggccatgccc
gcctatggatcggaaaatgcgcggccagccttcgacgcgatgccctggcgcgatcttcgc
gaggctggtgccgatttcaaggcgtggaagacagggcgcacgggctatcccattgtcgat
gccggcatgcggcagctctggacgacgggctggatgcataatcgggtgcgcatgatcgcg
gccagcttcctgatcaagcatctgctgatcgactggcggcatggggcgcgctggttctgg
gatacgctggtcgatgcgagctacgccaataatagcgtcaactggcaatgggttgcaggc
agcggcgtcgatgccaatatcttctcgcggatcatggcgcccctgacccagtcgggaaag
ttcgacgccgcagactatatcagggcctgggtgccggaactggcgcatctgaacgatgac
atcattcacgaccccgaagcgcatgacgcgcgttcgtccgattatccggccaagtgcatc
ggtcatcgggaggggcgtgaacgggctctcgccgcatggcgcgggatcaggccatga
DBGET
integrated database retrieval system
